Evidence map›Paper›PMID 18621681›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Crystal structures of substrate-bound and substrate-free cytochrome P450 46A1, the principal cholesterol hydroxylase in the brain.

Natalia Mast, Mark Andrew White, Ingemar Bjorkhem, Eric F Johnson, C David Stout, Irina A Pikuleva

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03706885 (A Proof-of-Concept Clinical Research Study of Efavirenz in Patients With Alzheimer's Disease), which is not on this map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03706885 phase1completednot on this mapstarted 2018, after this paper: background citation

A Proof-of-Concept Clinical Research Study of Efavirenz in Patients With Alzheimer's Disease

TypeinterventionalSponsorCase Western Reserve UniversityRan2018 to 2022Enrolled5ConditionsAlzheimer Disease, Early OnsetArmsSustiva Pill
3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 137 citations in OpenAlex.

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  14. Synthesis and pharmacokinetic study of aBioorganic & medicinal chemistry letters · 2020
    Article
  15. Article
  16. Cholesterol 24-Hydroxylation by CYP46A1: Benefits of Modulation for Brain Diseases.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Natalia MastDepartment of Pharmacology and Toxicology, The Sealy Center for Structural Biology and Molecular Biophysics, University of Texas Medical Branch, Galveston, TX 77555, USA.
Mark Andrew White
Ingemar Bjorkhem
Eric F Johnson
C David Stout
Irina A Pikuleva
The University of Texas Medical Branch at Galveston · USScripps Research Institute · USKarolinska Institutet · SE

Funding

CYTOCHROME P450 POLYMORPHISMR01GM031001 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI JOHNSON, ERIC F · 1985 to 2022
$16.2M
Significance of CYP46A1 and other P450s in retinal functionR01EY018383 · NEI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI PIKULEVA, IRINA A · 2007 to 2024
$6.8M
Structure and function of cholesterol metabolizing P450sR01GM062882 · NIGMS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PIKULEVA, IRINA A · 2001 to 2019
$5.5M
Cholesterol-metabolizing P450s and Alzheimer's diseaseK02AG024336 · NIA · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PIKULEVA, IRINA A · 2005 to 2009
$515k
NEI NIH HHS EY018383NEI NIH HHS R01 EY018383NIA NIH HHS AG024336NIA NIH HHS K02 AG024336NIGMS NIH HHS GM031001NIGMS NIH HHS GM62882NIGMS NIH HHS R01 GM031001NIGMS NIH HHS R01 GM062882
6 · The paper itself

Abstract

By converting cholesterol to 24S-hydroxycholesterol, cytochrome P450 46A1 (CYP46A1) initiates the major pathway for cholesterol removal from the brain. Two crystal structures of CYP46A1 were determined. First is the 1.9-A structure of CYP46A1 complexed with a high-affinity substrate cholesterol 3-sulfate (CH-3S). The second structure is that of the substrate-free CYP46A1 at 2.4-A resolution. CH-3S is bound in the productive orientation and occupies the entire length of the banana-shaped hydrophobic active-site cavity. A unique helix B'-C loop insertion (residues 116-120) contributes to positioning cholesterol for oxygenation catalyzed by CYP46A1. A comparison with the substrate-free structure reveals substantial substrate-induced conformational changes in CYP46A1 and suggests that structurally distinct compounds could bind in the enzyme active site. In vitro assays were performed to characterize the effect of different therapeutic agents on cholesterol hydroxylase activity of purified full-length recombinant CYP46A1, and several strong inhibitors and modest coactivators of CYP46A1 were identified. Structural and biochemical data provide evidence that CYP46A1 activity could be altered by exposure to some therapeutic drugs and potentially other xenobiotics.

Indexed as

Binding SitesBrain ChemistryCholesterol 24-HydroxylaseCrystallography, X-RayHumansLigandsProtein BindingProtein ConformationSteroid HydroxylasesCholesterol 24-HydroxylaseLigandsSteroid Hydroxylases

Identifiers

PMID18621681
PMCPMC2474539
OpenAlexW1972490547

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.