Evidence map›Paper›PMID 18616807›Full record

ArticleBMC evolutionary biology2008

The origin and evolution of plant cystatins and their target cysteine proteinases indicate a complex functional relationship.

Manuel Martinez, Isabel Diaz

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
10.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 158 citations in OpenAlex.

  1. Review
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  9. Genome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2021
    Article
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  12. Article
  13. Papain-Like Cysteine Protease Gene Family in Fig (Frontiers in plant science · 2021
    Article
  14. Article
  15. Article
  16. Insights on the Proteases Involved in Barley and Wheat Grain Germination.International journal of molecular sciences · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Plant Vacuolar Processing Enzymes.Frontiers in plant science · 2019
    Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Manuel MartinezLaboratorio de Bioquímica y Biología Molecular, Dpto, de Biotecnología-Centro de Biotecnología y Genómica de Plantas-Universidad Politécnica de Madrid, ETS Ingenieros Agrónomos, Ciudad Universitaria s/n. 28040 Madrid, Spain. m.martinez@upm.es
Isabel Diaz
Centre for Plant Biotechnology and Genomics · ESUniversidad Politécnica de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCystatins and their putative targets, the families of cysteine proteinases C1A and C13 play key roles in plants. Comparative genomic analyses are powerful tools to obtain valuable insights into the conservation and evolution of the proteinases and their proteinaceous inhibitors, and could aid to elucidate issues concerning the function of these proteins.

resultsWe have performed an evolutionary comparative analysis of cysteine proteinases C1A and C13 and their putative inhibitors in representative species of different taxonomic groups that appeared during the evolution of the Viridiplantae. The results indicate that whereas C1A cysteine proteinases are present in all taxonomic groups, cystatins and C13 cysteine proteinases are absent in some basal groups. Moreover, gene duplication events have been associated to the increasing structural and functional complexities acquired in land plants.

conclusionComparative genomic analyses have provided us valuable insights into the conservation and evolution of the cystatin inhibitory family and their putative targets, the cysteine proteinases from families C1A and C13. Functionality of both families of proteins in plants must be the result of a coevolutionary process that might have occurred during the evolution of basal and land plants leading to a complex functional relationship among them.

Indexed as

Evolution, MolecularCystatinsCysteine EndopeptidasesPhylogenyPlantsCystatinsCysteine Endopeptidases

Identifiers

PMID18616807
PMCPMC2474614
OpenAlexW2132333544

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.