Evidence map›Paper›PMID 18615016›Full record

ArticleNature2008

Drosophila RNAi screen identifies host genes important for influenza virus replication.

Linhui Hao, Akira Sakurai, Tokiko Watanabe, Ericka Sorensen, Chairul A Nidom, Michael A Newton, Paul Ahlquist, Yoshihiro Kawaoka

Open access · bronzeAbstract read
In one paragraph

Article in Nature, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 286 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
286citing papers in PubMed, 1 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

286 citing papers in PubMed, 1 synthesis or guideline pooled it, 426 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. The ribosomal landscape in influenza A virus infection: from molecular mechanisms to clinical relevance.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  6. Article
  7. International journal of molecular sciences · 2025
    Review
  8. Shared host genetic landscape of respiratory viral infection.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. PA and PA-X: two key proteins from segment 3 of the influenza viruses.Frontiers in cellular and infection microbiology · 2025
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. High-Throughput cell-based immunofluorescence assays against influenza.SLAS discovery : advancing life sciences R & D · 2024
    Article
  17. Article
  18. Article
  19. Review
  20. Article

226 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 6 countries.

Linhui HaoInstitute for Molecular Virology, USA.
Akira Sakurai
Tokiko Watanabe
Ericka Sorensen
Chairul A Nidom
Michael A Newton
Paul Ahlquist
Yoshihiro Kawaoka
Shandong Geological Sciences Institute · CNInstitute of Virology of the Slovak Academy of Sciences · SKAirlangga University · IDHoward Hughes Medical Institute · USUniversity of Wisconsin–Madison · US

Funding

Transmissibility of avian influenza viruses in mammalsR01AI069274 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KAWAOKA, YOSHIHIRO · 2006 to 2016
$5.5M
INFLUENZA VIRUS ASSEMBLYR01AI047446 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KAWAOKA, YOSHIHIRO · 2000 to 2009
$3.9M
MOLECULAR MECHANISMS OF INFLUENZA PANDEMICSR01AI044386 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KAWAOKA, YOSHIHIRO · 1999 to 2008
$3.6M
GENE FUNCTIONS AND MOLECULAR GENETICS OF RNA VIRUSESR37GM035072 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI AHLQUIST, PAUL G. · 1995 to 2004
$1.9M
GENE FUNCTIONS AND MOLECULAR GENETICS OF RNA VIRUSESR01GM035072 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AHLQUIST, PAUL G. · 1985 to 2009
$1.6M
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI044386NIAID NIH HHS R01 AI047446NIAID NIH HHS R01 AI069274NIGMS NIH HHS GM35072NIGMS NIH HHS R01 GM035072NIGMS NIH HHS R37 GM035072
6 · The paper itself

Abstract

All viruses rely on host cell proteins and their associated mechanisms to complete the viral life cycle. Identifying the host molecules that participate in each step of virus replication could provide valuable new targets for antiviral therapy, but this goal may take several decades to achieve with conventional forward genetic screening methods and mammalian cell cultures. Here we describe a novel genome-wide RNA interference (RNAi) screen in Drosophila that can be used to identify host genes important for influenza virus replication. After modifying influenza virus to allow infection of Drosophila cells and detection of influenza virus gene expression, we tested an RNAi library against 13,071 genes (90% of the Drosophila genome), identifying over 100 for which suppression in Drosophila cells significantly inhibited or stimulated reporter gene (Renilla luciferase) expression from an influenza-virus-derived vector. The relevance of these findings to influenza virus infection of mammalian cells is illustrated for a subset of the Drosophila genes identified; that is, for three implicated Drosophila genes, the corresponding human homologues ATP6V0D1, COX6A1 and NXF1 are shown to have key functions in the replication of H5N1 and H1N1 influenza A viruses, but not vesicular stomatitis virus or vaccinia virus, in human HEK 293 cells. Thus, we have demonstrated the feasibility of using genome-wide RNAi screens in Drosophila to identify previously unrecognized host proteins that are required for influenza virus replication. This could accelerate the development of new classes of antiviral drugs for chemoprophylaxis and treatment, which are urgently needed given the obstacles to rapid development of an effective vaccine against pandemic influenza and the probable emergence of strains resistant to available drugs.

Indexed as

RNA InterferenceAnimalsCell LineDrosophila melanogasterGene Expression RegulationGenome, InsectHost-Pathogen InteractionsHumansInfluenza A virusLuciferases, RenillaVaccinia virusVesiculovirusVirus ReplicationLuciferases, Renilla

Identifiers

PMID18615016
PMCPMC2574945
OpenAlexW2043698583

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.