ArticleMolecular genetics and genomics : MGG2008
Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome.
Article in Molecular genetics and genomics : MGG, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 30 citations in OpenAlex.
- A transposon-based genetic marker for conspecific identity within the Bactrocera dorsalis species complex.Scientific reports · 2024Article
- Exploiting the miniature inverted-repeat transposable elements insertion polymorphisms as an efficient DNA marker system for genome analysis and evolutionary studies in wheat and related species.Frontiers in plant science · 2022Article
- Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding.Molecular biology reports · 2020Review
- Molecular Characterization of Auxin Efflux Carrier- ABCB1 in hexaploid wheat.Scientific reports · 2019Article
- Evolutionary genomics of miniature inverted-repeat transposable elements (MITEs) in Brassica.Molecular genetics and genomics : MGG · 2015Article
- Widespread and evolutionary analysis of a MITE family Monkey King in Brassicaceae.BMC plant biology · 2015Article
- Identification, Diversity and Evolution of MITEs in the Genomes of Microsporidian Nosema Parasites.PloS one · 2015Article
- BrassicaTED - a public database for utilization of miniature transposable elements in Brassica species.BMC research notes · 2014Article
- Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome.BMC plant biology · 2013Article
- Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles in gene expression and species diversity in Oryza sativa.Molecular biology and evolution · 2012Article
- A single-base substitution suppresses flower color mutation caused by a novel miniature inverted-repeat transposable element in gentian.Molecular genetics and genomics : MGG · 2011Article
- BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space.Plant molecular biology · 2011Article
- Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development.BMC genomics · 2009Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 3 countries.
Funding
Abstract
Four previously undescribed families of miniature inverted repeat transposable elements (MITEs) were isolated by searching barley genomic DNA using structure-based criteria. Putative MITEs were confirmed by PCR to determine their insertional polymorphism in a panel of diverse barley germplasm. Copy numbers for all these familes are somewhat low (less than 1,000 copies per family per haploid genome). In contrast to previous studies, a higher proportion of insertions of the new MITEs are found within known transposable elements (27%) than are associated with genes (15%). Preliminary studies were conducted on two of the new MITE families to test their utility as molecular markers. Insertional polymorphism levels for both the families are high and diversity trees produced by both the families are similar and congruent with known relationships among the germplasm studied, suggesting that both the MITE families are useful markers of barley genetic diversity.
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