Evidence map›Paper›PMID 18611951›Full record

ArticleNucleic acids research2008

The RNA-binding protein TbDRBD3 regulates the stability of a specific subset of mRNAs in trypanosomes.

Antonio M Estévez

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 90 citations in OpenAlex.

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  9. RNA Binding Proteins and Gene Expression Regulation inFrontiers in cellular and infection microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Antonio M EstévezInstituto de Parasitología y Biomedicina López-Neyra, CSIC Avda. del Conocimiento s/n, Armilla, 18100-Granada, Spain. aestevez@ipb.csic.es
Instituto de Parasitología y Biomedicina "López - Neyra" · ES

Funding

Wellcome Trust
6 · The paper itself

Abstract

In trypanosomes, the apparent lack of regulation of RNA polymerase II-dependent transcription initiation poses a challenge to understand how these eukaryotes adjust gene expression to adapt to the contrasting environments they find during their life cycles. Evidence so far indicates that mRNA turnover and translation are the major control points in which regulation is exerted in trypanosomes. However, very little is known about which proteins are involved, and how do they regulate the abundance and translation of different mRNAs in different life stages. In this work, an RNA-binding protein, TbDRBD3, has been identified by affinity chromatography, and its function addressed using RNA interference, microarray analysis and immunoprecipitation of mRNA-protein complexes. The results obtained indicate that TbDRBD3 binds to a subset of developmentally regulated mRNAs encoding membrane proteins, and that this association promotes the stabilization of the target transcripts. These observations raise the possibility that TbDRBD3-mRNA complexes act as a post-transcriptional operon, and provide a framework to interpret how trypanosomes regulate gene expression in the absence of transcriptional control.

Indexed as

3' Untranslated RegionsAnimalsBinding SitesGene Expression Regulation, DevelopmentalMembrane Transport ProteinsPhosphoglycerate KinaseProtozoan ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, HelminthRNA InterferenceRNA, MessengerRNA StabilityTrypanosoma brucei brucei3' Untranslated RegionsMembrane Transport ProteinsPhosphoglycerate KinaseProtozoan ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, HelminthRNA, Messenger

Identifiers

PMID18611951
PMCPMC2504296
OpenAlexW2114091126

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.