Evidence map›Paper›PMID 18611445›Full record

ArticleThe international journal of biochemistry & cell biology2008

Decreased ER-associated degradation of alpha-TCR induced by Grp78 depletion with the SubAB cytotoxin.

Agnieszka Lass, Marek Kujawa, Elizabeth McConnell, Adrienne W Paton, James C Paton, Cezary Wójcik

Open access · greenAbstract read
In one paragraph

Article in The international journal of biochemistry & cell biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Genomic Epidemiology of Shiga Toxin-ProducingAnimals : an open access journal from MDPI · 2021
    Article
  3. Article
  4. Article
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  6. Article
  7. BiP prevents rod opsin aggregation.Molecular biology of the cell · 2012
    Article
  8. Article
  9. Targeting GRP78 to enhance melanoma cell death.Pigment cell & melanoma research · 2010
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Agnieszka LassDepartment of Anatomy and Cell Biology, Indiana University School of Medicine-Evansville, Evansville, IN 47712, USA.
Marek Kujawa
Elizabeth McConnell
Adrienne W Paton
James C Paton
Cezary Wójcik
Indiana University School of MedicineUniversity of Adelaide · AUMedical University of Warsaw · PL

Funding

Characterization of a novel AB5 cytotoxinR01AI068715 · NIAID · UNIVERSITY OF ADELAIDE · PI PATON, ADRIENNE W · 2007 to 2011
$1.3M
NIAID NIH HHS 1R01AI068715-01NIAID NIH HHS R01 AI068715
6 · The paper itself

Abstract

HeLa cells stably expressing the alpha chain of T-cell receptor (alphaTCR), a model substrate of ER-associated degradation (ERAD), were used to analyze the effects of BiP/Grp78 depletion by the SubAB cytotoxin. SubAB induced XBP1 splicing, followed by JNK phosphorylation, eIF2alpha phosphorylation, upregulation of ATF3/4 and partial ATF6 cleavage. Other markers of ER stress, including elements of ERAD pathway, as well as markers of cytoplasmic stress, were not induced. SubAB treatment decreased absolute levels of alphaTCR, which was caused by inhibition of protein synthesis. At the same time, the half-life of alphaTCR was extended almost fourfold from 70 min to 210 min, suggesting that BiP normally facilitates ERAD. Depletion of p97/VCP partially rescued SubAB-induced depletion of alphaTCR, confirming the role of VCP in ERAD of alphaTCR. It therefore appears that ERAD of alphaTCR is driven by at least two different ATP-ase systems located at two sides of the ER membrane, BiP located on the lumenal side, while p97/VCP on the cytoplasmic side. While SubAB altered cell morphology by inducing cytoplasm vacuolization and accumulation of lipid droplets, caspase activation was partial and subsided after prolonged incubation. Expression of CHOP/GADD153 occurred only after prolonged incubation and was not associated with apoptosis.

Indexed as

AnimalsChlorocebus aethiopsCOS CellsEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPEscherichia coli ProteinsHeat-Shock ProteinsHeLa CellsHumansMolecular ChaperonesProtein BiosynthesisReceptors, Antigen, T-CellRNA InterferenceSubtilisinsEndoplasmic Reticulum Chaperone BiPEscherichia coli ProteinsHeat-Shock ProteinsHSPA5 protein, humanMolecular ChaperonesReceptors, Antigen, T-Cellsubtilase cytotoxin, E coliSubtilisins

Identifiers

PMID18611445
PMCPMC2583149
OpenAlexW2094775539

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.