Evidence map›Paper›PMID 18611267›Full record

ArticleGenome biology2008

Concerted gene recruitment in early plant evolution.

Jinling Huang, J Peter Gogarten

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Evolution End Classification ofInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Review
  5. Article
  6. Horizontal gene transfer in eukaryotes: the weak-link model.BioEssays : news and reviews in molecular, cellular and developmental biology · 2013
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Horizontal gene transfer in evolution: facts and challenges.Proceedings. Biological sciences · 2010
    Review
  15. Article
  16. Article
  17. Horizontal gene transfer from extinct and extant lineages: biological innovation and the coral of life.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
    Review
  18. The network of life: genome beginnings and evolution. Introduction.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2009
    Article
  19. Evolution of plant senescence.BMC evolutionary biology · 2009
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Jinling HuangDepartment of Biology, Howell Science Complex, East Carolina University, Greenville, NC 27858, USA. huangj@ecu.edu
J Peter Gogarten
East Carolina University · USUniversity of Connecticut · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHorizontal gene transfer occurs frequently in prokaryotes and unicellular eukaryotes. Anciently acquired genes, if retained among descendants, might significantly affect the long-term evolution of the recipient lineage. However, no systematic studies on the scope of anciently acquired genes and their impact on macroevolution are currently available in eukaryotes.

resultsAnalyses of the genome of the red alga Cyanidioschyzon identified 37 genes that were acquired from non-organellar sources prior to the split of red algae and green plants. Ten of these genes are rarely found in cyanobacteria or have additional plastid-derived homologs in plants. These genes most likely provided new functions, often essential for plant growth and development, to the ancestral plant. Many remaining genes may represent replacements of endogenous homologs with a similar function. Furthermore, over 78% of the anciently acquired genes are related to the biogenesis and functionality of plastids, the defining character of plants.

conclusionOur data suggest that, although ancient horizontal gene transfer events did occur in eukaryotic evolution, the number of acquired genes does not predict the role of horizontal gene transfer in the adaptation of the recipient organism. Our data also show that multiple independently acquired genes are able to generate and optimize key evolutionary novelties in major eukaryotic groups. In light of these findings, we propose and discuss a general mechanism of horizontal gene transfer in the macroevolution of eukaryotes.

Indexed as

Evolution, MolecularGenes, PlantGene Transfer, HorizontalPhylogenyPlantsRhodophyta

Identifiers

PMID18611267
PMCPMC2530860
OpenAlexW2160008039

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.