Evidence map›Paper›PMID 18609703›Full record

ArticleWorld journal of gastroenterology2008

PCR-SSCP-DNA sequencing method in detecting PTEN gene mutation and its significance in human gastric cancer.

Chuan-Yong Guo, Xuan-Fu Xu, Jian-Ye Wu, Shu-Fang Liu

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Pathogenetic mechanisms in gastric cancer.World journal of gastroenterology · 2014
    Review
  3. Article
  4. Review
  5. Review
  6. Gastric cancer-molecular and clinical dimensions.Nature reviews. Clinical oncology · 2013
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Chuan-Yong GuoDepartment of Gastroenterology, Tenth People's Hospital of Tongji University, Shanghai, China. guochuanyong@hotmail.com
Xuan-Fu Xu
Jian-Ye Wu
Shu-Fang Liu
Post Graduate Institute of Medical Education and Research · INShanghai Tenth People's Hospital · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo discuss the possible effect of PTEN gene mutations on occurrence and development of gastric cancer.

methodsFifty-three gastric cancer specimens were selected to probe PTEN gene mutations in genome of gastric cancer and paracancerous tissues using PCR-SSCP-DNA sequencing method based on microdissection and to observe the protein expression by immunohistochemistry technique.

resultsPCR-SSCP-DNA sequencing indicated that 4 kinds of mutation sites were found in 5 of 53 gastric cancer specimens. One kind of mutation was found in exons. AA-TCC mutation was located at 40 bp upstream of 3' lateral exon 7 (115946 AA-TCC). Such mutations led to terminator formation in the 297th codon of the PTEN gene. The other 3 kinds of mutation were found in introns, including a G-C point mutation at 91 bp upstream of 5' lateral exon 5(90896 G-C), a T-G point mutation at 24 bp upstream of 5' lateral exon 5 (90963 T-G), and a single base A mutation at 7 bp upstream of 5' lateral exon 5 (90980 A del). The PTEN protein expression in gastric cancer and paracancerous tissues detected using immunohistochemistry technique indicated that the total positive rate of PTEN protein expression was 66% in gastric cancer tissue, which was significantly lower than that (100%) in paracancerous tissues (P < 0.005).

conclusionPTEN gene mutation and expression may play an important role in the occurrence and development of gastric cancer.

Indexed as

AdultAgedAged, 80 and overBase SequenceExonsFemaleHumansMaleMiddle AgedMutationPolymerase Chain ReactionPolymorphism, Single-Stranded ConformationalPTEN PhosphohydrolaseSequence Analysis, DNAStomach NeoplasmsPTEN PhosphohydrolasePTEN protein, human

Identifiers

PMID18609703
PMCPMC2721436
OpenAlexW1990025803

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.