Evidence map›Paper›PMID 18607769›Full record

ArticleMolecular biology reports2009

Molecular cloning and characterization of the Dicer-like 2 gene from Brassica rapa.

Fei Yan, Jiejun Peng, Yuwen Lu, Lin Lin, Hongying Zheng, Hairu Chen, Jianping Chen, Michael J Adams

Abstract read
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In one paragraph

Article in Molecular biology reports, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Fei YanInstitute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, People's Republic of China.
Jiejun Peng
Yuwen Lu
Lin Lin
Hongying Zheng
Hairu Chen
Jianping Chen
Michael J Adams
ZheJiang Academy of Agricultural Sciences · CNRothamsted Research · GBYunnan Agricultural University · CN

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Dicer-like proteins (DCLs) are involved in small RNA-mediated development and viral defense in plants. In model plants, at least four DCLs have been found and a number of studies have helped to understand their function. However, the function of the Dicer or DCLs in other plants is still unclear. Here, we report the full-length cDNA sequence of Brassica rapa ssp. chinensis DCL2 (BrDCL2) gene, which contains a 4,179 bp open reading frame (ORF) encoding a protein of 1,392 amino acids. At the 3' end of BrDCL2, clones with three different lengths of 3' untranslated region were found. An alternative splice variant of BrDCL2, BrDCL2sv, in which one intron was retained between exon9 and exon10, was also cloned. Because of a change in the coding sequence resulting in a premature terminal codon, BrDCL2sv was expected to translate a short peptide containing the whole DEXHc domain.

Indexed as

3' Untranslated RegionsBase SequenceBrassica rapaCloning, MolecularDNA, ComplementaryHumansMolecular Sequence DataOpen Reading FramesPlant ProteinsProtein IsoformsRibonuclease III3' Untranslated RegionsDNA, ComplementaryPlant ProteinsProtein IsoformsRibonuclease III

Identifiers

PMID18607769
OpenAlexW1990493604

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.