Evidence map›Paper›PMID 18606245›Full record

ArticleMicrobes and infection2008

A single amino acid substitution in the S1 and S2 Spike protein domains determines the neutralization escape phenotype of SARS-CoV.

Yu-ya Mitsuki, Kazuo Ohnishi, Hirotaka Takagi, Masamichi Oshima, Takuya Yamamoto, Fuminori Mizukoshi, Kazutaka Terahara, Kazuo Kobayashi, Naoki Yamamoto, Shoji Yamaoka and 1 more

Abstract read
In one paragraph

Article in Microbes and infection, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
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  4. Long Term Immune Response Produced by the SputnikV Vaccine.International journal of molecular sciences · 2021
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  5. Review
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  7. Article
  8. Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Synthetic recombinant bat SARS-like coronavirus is infectious in cultured cells and in mice.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yu-ya MitsukiDepartment of Immunology, National Institute of Infectious Diseases, Toyama 1-23-1, Tokyo 162-8640, Japan.
Kazuo Ohnishi
Hirotaka Takagi
Masamichi Oshima
Takuya Yamamoto
Fuminori Mizukoshi
Kazutaka Terahara
Kazuo Kobayashi
Naoki Yamamoto
Shoji Yamaoka
Yasuko Tsunetsugu-Yokota
National Institute of Infectious Diseases · JPTokyo Medical and Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to SARS-CoV infection, neutralizing antibodies are generated against the Spike (S) protein. Determination of the active regions that allow viral escape from neutralization would enable the use of these antibodies for future passive immunotherapy. We immunized mice with UV-inactivated SARS-CoV to generate three anti-S monoclonal antibodies, and established several neutralization escape mutants with S protein. We identified several amino acid substitutions, including Y442F and V601G in the S1 domain and D757N and A834V in the S2 region. In the presence of each neutralizing antibody, double mutants with substitutions in both domains exhibited a greater growth advantage than those with only one substitution. Importantly, combining two monoclonal antibodies that target different epitopes effected almost complete suppression of wild type virus replication. Thus, for effective passive immunotherapy, it is important to use neutralizing antibodies that recognize both the S1 and S2 regions.

Indexed as

Amino Acid SubstitutionAnimalsAntibodies, MonoclonalAntibodies, ViralMembrane GlycoproteinsMiceMutation, MissenseNeutralization TestsProtein Structure, TertiarySevere acute respiratory syndrome-related coronavirusSpike Glycoprotein, CoronavirusViral Envelope ProteinsViral Plaque AssayVirus ReplicationAntibodies, MonoclonalAntibodies, ViralMembrane GlycoproteinsSpike Glycoprotein, Coronavirusspike glycoprotein, SARS-CoVspike protein, mouse hepatitis virusViral Envelope Proteins

Identifiers

PMID18606245
PMCPMC7110505
OpenAlexW2019312542

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.