Evidence map›Paper›PMID 18602400›Full record

ArticleJournal of molecular biology2008

SecA, the motor of the secretion machine, binds diverse partners on one interactive surface.

Dylan B Cooper, Virginia F Smith, Jennine M Crane, Hilary C Roth, Angela A Lilly, Linda L Randall

Abstract read
In one paragraph

Article in Journal of molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Specific cardiolipin-SecY interactions are required for proton-motive force stimulation of protein secretion.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. Review
  8. Article
  9. The basis of asymmetry in the SecA:SecB complex.Journal of molecular biology · 2015
    Article
  10. SecA: a potential antimicrobial target.Future medicinal chemistry · 2015
    Review
  11. Review
  12. Stoichiometry of SecYEG in the active translocase of Escherichia coli varies with precursor species.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  13. Article
  14. Article
  15. Article
  16. SecA, a remarkable nanomachine.Cellular and molecular life sciences : CMLS · 2011
    Review
  17. Energetics of SecA dimerization.Journal of molecular biology · 2011
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dylan B CooperDepartment of Biochemistry, 117 Schweitzer Hall, University of Missouri, Columbia, MO 65211, USA.
Virginia F Smith
Jennine M Crane
Hilary C Roth
Angela A Lilly
Linda L Randall

Funding

The Export of Proteins in Escherichia Coli; Administrative Supplement for EquipmentR01GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1985 to 2019
$7.7M
EXPORT OF PROTEINS IN ESCHERICHIA COLIR37GM029798 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RANDALL, LINDA L. · 1993 to 2002
$1.1M
NIGMS NIH HHS GM29798NIGMS NIH HHS R01 GM029798NIGMS NIH HHS R37 GM029798
6 · The paper itself

Abstract

In all living cells, regulated passage across membranes of specific proteins occurs through a universally conserved secretory channel. In bacteria and chloroplasts, the energy for the mechanical work of moving polypeptides through that channel is provided by SecA, a regulated ATPase. Here, we use site-directed spin labeling and electron paramagnetic resonance spectroscopy to identify the interactive surface used by SecA for each of the diverse binding partners encountered during the dynamic cycle of export. Although the binding sites overlap, resolution at the level of aminoacyl side chains allows us to identify contacts that are unique to each partner. Patterns of constraint and mobilization of residues on that interactive surface suggest a conformational change that may underlie the coupling of ATP hydrolysis to precursor translocation.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsBinding SitesEscherichia coliLigandsMembrane Transport ProteinsModels, MolecularMolecular Motor ProteinsPeptidesProtein BindingProtein FoldingProtein Structure, SecondarySecA ProteinsSEC Translocation ChannelsSpin LabelsSurface PropertiesAdenosine TriphosphatasesBacterial ProteinsLigandsMembrane Transport ProteinsMolecular Motor ProteinsPeptidesSecA ProteinsSEC Translocation ChannelsSpin Labels

Identifiers

PMID18602400
PMCPMC2633600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.