Evidence map›Paper›PMID 18599442›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

An in vivo gene deletion system for determining temporal requirement of bacterial virulence factors.

Yancheng Liu, Ping Gao, Simran Banga, Zhao-Qing Luo

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Molecular evolution and adaptations ofFrontiers in cellular and infection microbiology · 2026
    Review
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  12. The protein SdhA maintains the integrity of the Legionella-containing vacuole.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yancheng LiuDepartment of Biological Sciences, Purdue University, 915 West State Street, West Lafayette, IN 47907, USA.
Ping Gao
Simran Banga
Zhao-Qing Luo
State Street (United States) · USHarvard University · US

Funding

Modulation of host Apoptotic pathways by Legionella pneumophilaR01AI069344 · NIAID · PURDUE UNIVERSITY · PI LUO, ZHAO-QING · 2007 to 2011
$1.5M
NIAID NIH HHS R01 AI069344NIAID NIH HHS R01AI1069344
6 · The paper itself

Abstract

Analysis of phenotypes associated with specific mutants has been instrumental in determining the roles of a bacterial gene in a biological process. However, this technique does not allow one to address whether a specific gene or gene set is necessary to maintain such a process once it has been established. In the study of microbial pathogenesis, it is important but difficult to determine the temporal requirement of essential pathogenic determinants in the entire infection cycle. Here we report a Cre/loxP-based genetic system that allowed inducible deletion of specific bacterial genes after the pathogen had been phagocytosed by host cells. Using this system, we have examined the temporal requirement of the Dot/Icm type IV protein transporter of Legionella pneumophila during infection. We found that deletion of single essential dot/icm genes did not prevent the internalized bacteria from completing one cycle of intracellular replication. Further analyses indicate that the observed phenotypes were due to the high stability of the examined Dot/Icm protein. However, postinfection deletion within 8 h of the gene coding for the Dot/Icm substrate, SdhA, abolishes intracellular bacterial growth. This result indicates that the Dot/Icm transporter is important for intracellular bacterial growth after the initial biogenesis of the vacuole. Our study has provided a technical concept for analyzing the temporal requirement of specific bacterial proteins or protein complexes in infection or development.

Indexed as

Gene DeletionBacterial InfectionsBacterial ProteinsCell DeathChromosomes, BacterialGenes, BacterialIntracellular SpaceIsopropyl ThiogalactosideLegionella pneumophilaMacrophagesMembrane Transport ProteinsPhagocytosisTime FactorsVirulence FactorsBacterial ProteinsICMQ protein, Legionella pneumophilaIsopropyl ThiogalactosideMembrane Transport ProteinsVirulence Factors

Identifiers

PMID18599442
PMCPMC2453721
OpenAlexW2098817619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.