Evidence map›Paper›PMID 18596936›Full record

ArticlePloS one2008

Sex-specific expression of the X-linked histone demethylase gene Jarid1c in brain.

Jun Xu, Xinxian Deng, Christine M Disteche

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. The Chromatin-Oxygen Sensor GeneInternational journal of molecular sciences · 2022
    Article
  11. Article
  12. Histone Modifications in Neurological Disorders.Advances in experimental medicine and biology · 2022
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Preventing epigenetic traces of caregiver maltreatment: A role for HDAC inhibition.International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience · 2019
    Article
  19. Review
  20. DoesFrontiers in neuroscience · 2019
    Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jun XuDepartment of Pathology, University of Washington, Seattle, Washington, United States of America. jun.xu@tufts.edu
Xinxian Deng
Christine M Disteche
University of Washington · US

Funding

Mouse X InactivationR01GM046883 · NIGMS · UNIVERSITY OF WASHINGTON · PI DISTECHE, CHRISTINE M. · 1992 to 2018
$5.9M
DOSAGE COMPENSATION OF THE ACTIVE X CHROMOSOME IN MAMMALSR01GM079537 · NIGMS · UNIVERSITY OF WASHINGTON · PI DISTECHE, CHRISTINE M. · 2007 to 2010
$1.2M
X-inactivation Related to Sex Differences in the BrainR03HD043942 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI XU, JUN · 2003 to 2004
$153k
NICHD NIH HHS HD43942NICHD NIH HHS R03 HD043942NIGMS NIH HHS GM46883NIGMS NIH HHS GM79537NIGMS NIH HHS R01 GM046883NIGMS NIH HHS R01 GM079537
6 · The paper itself

Abstract

Jarid1c, an X-linked gene coding for a histone demethylase, plays an important role in brain development and function. Notably, JARID1C mutations cause mental retardation and increased aggression in humans. These phenotypes are consistent with the expression patterns we have identified in mouse brain where Jarid1c mRNA was detected in hippocampus, hypothalamus, and cerebellum. Jarid1c expression and associated active histone marks at its 5'end are high in P19 neurons, indicating that JARID1C demethylase plays an important role in differentiated neuronal cells. We found that XX mice expressed Jarid1c more highly than XY mice, independent of their gonadal types (testes versus ovaries). This increased expression in XX mice is consistent with Jarid1c escape from X inactivation and is not compensated by expression from the Y-linked paralogue Jarid1d, which is expressed at a very low level compared to the X paralogue in P19 cells. Our observations suggest that sex-specific expression of Jarid1c may contribute to sex differences in brain function.

Indexed as

Genes, X-LinkedAnimalsBrainCells, CulturedFemaleHistone DemethylasesHistonesHumansIn Situ HybridizationMaleMiceMice, Inbred C57BLMice, TransgenicOxidoreductases, N-DemethylatingProteinsSex CharacteristicsHistone DemethylasesHistonesKdm5c protein, mouseOxidoreductases, N-DemethylatingProteins

Identifiers

PMID18596936
PMCPMC2438472
OpenAlexW1977661076

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.