Evidence map›Paper›PMID 18593880›Full record

ArticleGenes & development2008

Distinct activities of the DExD/H-box splicing factor hUAP56 facilitate stepwise assembly of the spliceosome.

Haihong Shen, Xuexiu Zheng, Jingping Shen, Lingdi Zhang, Rui Zhao, Michael R Green

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 104 citations in OpenAlex.

  1. The cellular landscape of druggable RNA-binding proteins.Nature reviews. Drug discovery · 2026
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Haihong ShenDepartment of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea. haihongshen@gist.ac.kr
Xuexiu Zheng
Jingping Shen
Lingdi Zhang
Rui Zhao
Michael R Green
Gwangju Institute of Science and Technology · KRUniversity of Colorado Anschutz Medical Campus · USHoward Hughes Medical Institute · USUniversity of Colorado Denver · US

Funding

SPLICING OF MRNA PRECURSORSR01GM035490 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GREEN, MICHAEL R · 1985 to 2021
$4.7M
NIGMS NIH HHS R01 GM035490
6 · The paper itself

Abstract

The essential splicing factor human UAP56 (hUAP56) is a DExD/H-box protein known to promote prespliceosome assembly. Here, using a series of hUAP56 mutants that are defective for ATP-binding, ATP hydrolysis, or dsRNA unwindase/helicase activity, we assess the relative contributions of these biochemical functions to pre-mRNA splicing. We show that prespliceosome assembly requires hUAP56's ATP-binding and ATPase activities, which, unexpectedly, are required for hUAP56 to interact with U2AF(65) and be recruited into splicing complexes. Surprisingly, we find that hUAP56 is also required for mature spliceosome assembly, which requires, in addition to the ATP-binding and ATPase activities, hUAP56's dsRNA unwindase/helicase activity. We demonstrate that hUAP56 directly contacts U4 and U6 snRNAs and can promote unwinding of the U4/U6 duplex, and that both these activities are dependent on U2AF(65). Our results indicate that hUAP56 first interacts with U2AF(65) in an ATP-dependent manner, and subsequently with U4/U6 snRNAs to facilitate stepwise assembly of the spliceosome.

Indexed as

Adenosine TriphosphateDEAD-box RNA HelicasesHeLa CellsHumansHydrolysisMutationNuclear ProteinsProtein BindingRibonucleoproteinsRibonucleoprotein, U4-U6 Small NuclearRNA, Double-StrandedRNA PrecursorsRNA, Small NuclearRNA SplicingSpliceosomesSplicing Factor U2AFAdenosine TriphosphateDDX39B protein, humanDEAD-box RNA HelicasesNuclear ProteinsRibonucleoproteinsRibonucleoprotein, U4-U6 Small NuclearRNA, Double-StrandedRNA PrecursorsRNA, Small NuclearSplicing Factor U2AFU2AF2 protein, humanU6 small nuclear RNA

Identifiers

PMID18593880
PMCPMC2492666
OpenAlexW1997961264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.