ArticleMolecular biotechnology2008
cDNA-AFLP analysis reveals differential gene expression in response to salt stress in foxtail millet (Setaria italica L.).
Article in Molecular biotechnology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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36 citing papers in PubMed, 91 citations in OpenAlex.
- Article
- Overexpression of Phosphoenolpyruvate Carboxykinase Increases Photosynthetic Efficiency and Salt Tolerance in Rice.Plants (Basel, Switzerland) · 2026Article
- Putrescine mitigates NaCl-induced stress by modulating gene expression, antioxidants, and ethylene level in tomato.Plant signaling & behavior · 2025Article
- Physiological Mechanisms and Core Genes in Response to Saline-Alkali Stress in Foxtail Millet (Biomolecules · 2025Article
- Phosphoproteomics analysis of acid stress response of Alicyclobacillus acidoterrestris in response to acid stress.Applied microbiology and biotechnology · 2025Article
- SiCST1, a novel plant-specific protein of foxtail millet, confers cold stress tolerance in plants.Frontiers in plant science · 2025Article
- Effects of copper, and aluminium in ionic, and nanoparticulate form on growth rate and gene expression of Setaria italica seedlings.Scientific reports · 2024Article
- Influence of High-Temperature and Intense Light on the Enzymatic Antioxidant System in Ginger (Metabolites · 2023Article
- Review
- The Developmental Delay of Seedlings With Cotyledons Only Confers Stress Tolerance toFrontiers in plant science · 2022Article
- Salicylic acid modulates ACS, NHX1, sos1 and HKT1;2 expression to regulate ethylene overproduction and NaPlant signaling & behavior · 2021Article
- Application of gamma rays on salinity tolerance of wheat (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Nitrogen, phosphorus and high COPhotosynthesis research · 2021Article
- Deciphering the microbial and molecular responses of geographically diverse Setaria accessions grown in a nutrient-poor soil.PloS one · 2021Article
- Adaptation of Foxtail Millet (Frontiers in plant science · 2020Review
- Healthy and Resilient Cereals and Pseudo-Cereals for Marginal Agriculture: Molecular Advances for Improving Nutrient Bioavailability.Frontiers in genetics · 2020Review
- Molecular Approaches to Understand Nutritional Potential of Coarse Cereals.Current genomics · 2016Article
- Ocimum sanctum leaf extract induces drought stress tolerance in rice.Plant signaling & behavior · 2016Article
- Dose-dependent response of Trichoderma harzianum in improving drought tolerance in rice genotypes.Planta · 2016Article
- Stress-induced Oryza sativa BAT1 dual helicase exhibits unique bipolar translocation.Protoplasma · 2015Article
Corrections and comments
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant growth and productivity are affected by various abiotic stresses such as heat, drought, cold, salinity, etc. The mechanism of salt tolerance is one of the most important subjects in plant science as salt stress decreases worldwide agricultural production. In our present study we used cDNA-AFLP technique to compare gene expression profiles of a salt tolerant and a salt-sensitive cultivar of foxtail millet (Seteria italica) in response to salt stress to identify early responsive differentially expressed transcripts accumulated upon salt stress and validate the obtained result through quantitative real-time PCR (qRT-PCR). The expression profile was compared between a salt tolerant (Prasad) and susceptible variety (Lepakshi) of foxtail millet in both control condition (L0 and P0) and after 1 h (L1 and P1) of salt stress. We identified 90 transcript-derived fragments (TDFs) that are differentially expressed, out of which 86 TDFs were classified on the basis of their either complete presence or absence (qualitative variants) and 4 on differential expression pattern levels (quantitative variants) in the two varieties. Finally, we identified 27 non-redundant differentially expressed cDNAs that are unique to salt tolerant variety which represent different groups of genes involved in metabolism, cellular transport, cell signaling, transcriptional regulation, mRNA splicing, seed development and storage, etc. The expression patterns of seven out of nine such genes showed a significant increase of differential expression in tolerant variety after 1 h of salt stress in comparison to salt-sensitive variety as analyzed by qRT-PCR. The direct and indirect relationship of identified TDFs with salinity tolerance mechanism is discussed.
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