Evidence map›Paper›PMID 18592283›Full record

ArticleFunctional & integrative genomics2008

Genomic differences between Campylobacter jejuni isolates identify surface membrane and flagellar function gene products potentially important for colonizing the chicken intestine.

Kelli L Hiett, Alain Stintzi, Tracy M Andacht, Robin L Kuntz, Bruce S Seal

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In one paragraph

Article in Functional & integrative genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

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  6. The role of probiotics in the inhibition of Campylobacter jejuni colonization and virulence attenuation.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kelli L HiettAgricultural Research Service, Poultry Microbiological Safety Research Unit, Russell Research Center, United States Department of Agriculture, P.O. Box 5677, Athens, GA, 30604-5677, USA. kelli.hiett@ars.usda.gov
Alain Stintzi
Tracy M Andacht
Robin L Kuntz
Bruce S Seal
United States Department of Agriculture · USUniversity of Georgia · USUniversity of Ottawa · CA

Funding

Campylobacter colonization and virulence determinantsR01AI055612 · NIAID · UNIVERSITY OF OTTAWA · PI STINTZI, ALAIN C · 2003 to 2007
$1.1M
NIAID NIH HHS NIH-AI055612
6 · The paper itself

Abstract

Campylobacter spp. are one of the leading bacterial etiologic agents of acute human gastroenteritis among industrialized countries. Poultry are implicated as a major source of the organism for human illness; however, the factors involved with colonization of poultry gastrointestinal systems remain unclear. Genomics and proteomics analyses were used to identify differences between poor- versus robust-colonizing Campylobacter jejuni isolates, 11168(GS) and A74/C, respectively. Sequence analyses of subtracted DNA resulted in A74/C-specifc genes similar to a dimethyl sulfoxide reductase, a serine protease, polysaccharide modification proteins, and restriction modification proteins. DNA microarray analyses were performed for comparison of A74/C to the complete genome sequences published for two C. jejuni. A total of 114 genes (7.1%) were determined absent from A74/C relative to those genomes. Additionally, proteomics was completed on both soluble and membrane protein extracts from 11168(GS) and A74/C. Variation in protein expression and physical characteristics such as pI was detected between the two isolates that included the major outer membrane protein, flagella, and aconitate hydratase. Several proteins including cysteine synthase and a Ni/Fe hydrogenase were determined to be differentially present between the two isolates. Finally, DNA hybridization analyses of 19 C. jejuni isolates recovered from chickens and humans worldwide over the past 20 years were performed to determine the distribution of a subset of differentially identified gene sequences.

Indexed as

AnimalsCampylobacter jejuniChickensGene Expression ProfilingGenome, BacterialHumansIntestinesOligonucleotide Array Sequence AnalysisPoultry Diseases

Identifiers

PMID18592283
OpenAlexW2097695742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.