Evidence map›Paper›PMID 18575603›Full record

ArticlePLoS neglected tropical diseases2008

Macrophage and T-cell gene expression in a model of early infection with the protozoan Leishmania chagasi.

Nicholas A Ettinger, Mary E Wilson

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  5. Unwinding the mechanism of macrophage repolarization potential ofFrontiers in cellular and infection microbiology · 2023
    Article
  6. Review
  7. Article
  8. Model-based Evaluation of Gene Expression Changes in Response toGene regulation and systems biology · 2019
    Review
  9. Article
  10. Review
  11. Nivolumab EnhancesFrontiers in immunology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Nicholas A EttingerInterdisciplinary Graduate Program in Molecular and Cellular Biology, University of Iowa, Iowa City, Iowa, USA.
Mary E Wilson
Iowa City VA Medical Center · USUniversity of Iowa · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
The role of Leishmania braziliensis strain polymorphism on disease outcome and ..P50AI030639 · NIAID · FEDERAL UNIVERSITY OF BAHIA · PI CARVALHO, EDGAR M · 1991 to 2023
$9.1M
TRAINING IN MECHANISMS OF PARASITISMT32AI007511 · NIAID · UNIVERSITY OF IOWA · PI BUTLER, NOAH SULLIVAN, WEBER, MARY · 1996 to 2025
$8.1M
Immunogenetics of Leishmania chagasi InfectionR01AI048822 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY EDYTHE · 2001 to 2005
$3.2M
Protective Immunity to Leishmania chagasiR01AI045540 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY E · 2001 to 2011
$3.1M
Collaborative Development of a Vaccine against Cutaneous and Visceral LeishmaniasR01AI067874 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY E · 2006 to 2010
$2.2M
Zinc metalloprotease families in Trypansoma bruceiR01AI059451 · NIAID · UNIVERSITY OF IOWA · PI DONELSON, JOHN E · 2005 to 2009
$1.7M
Genetic Risk Factors for Visceral LeishmaniasisR01AI076233 · NIAID · UNIVERSITY OF IOWA · PI BLACKWELL, JENEFER MARY, WILSON, MARY E · 2009 to 2013
$1.6M
Innate inflammatory cells in leishmaniasisI01BX001983 · VA · IOWA CITY VA MEDICAL CENTER · PI WILSON, MARY E · 2014 to 2022
–
NIAID NIH HHS P50 AI030639NIAID NIH HHS P50 AI-30639NIAID NIH HHS R01 AI045540NIAID NIH HHS R01 AI048822NIAID NIH HHS R01 AI059451NIAID NIH HHS R01 AI067874NIAID NIH HHS R01 AI076233NIAID NIH HHS T32 AI007511NIAID NIH HHS T32 AI07511NIGMS NIH HHS T32 GM007337NIGMS NIH HHS T32 GM07337
6 · The paper itself

Abstract

Visceral leishmaniasis is a potentially fatal infectious disease caused by the protozoan parasite Leishmania infantum/chagasi in the New World, or by L. donovani or L. infantum/chagasi in the Old World. Infection leads to a variety of outcomes ranging from asymptomatic infection to active disease, characterized by fevers, cachexia, hepatosplenomegaly and suppressed immune responses. We reasoned that events occurring during the initial few hours when the parasite encounters cells of the innate and adaptive immune systems are likely to influence the eventual immune response that develops. Therefore, we performed gene expression analysis using Affymetrix U133Plus2 microarray chips to investigate a model of early infection with human monocyte-derived macrophages (MDMs) challenged with wild-type L. chagasi parasites, with or without subsequent co-culture with Leishmania-naïve, autologous T-cells. Microarray data generated from total RNA were analyzed with software from the Bioconductor Project and functional clustering and pathway analysis were performed with DAVID and Gene Set Enrichment Analysis (GSEA), respectively. Many transcripts were down-regulated by infection in cultures containing macrophages alone, and the pattern indicated a lack of a classically activated phenotype. By contrast, the addition of autologous Leishmania-naïve T cells to infected macrophages resulted in a pattern of gene expression including many markers of type 1 immune cytokine activation (IFN-gamma, IL-6, IL-1alpha, IL-1beta). There was simultaneous up-regulation of a few markers of immune modulation (IL-10 cytokine accumulation; TGF-beta Signaling Pathway). We suggest that the initial encounter between L. chagasi and cells of the innate and adaptive immune system stimulates primarily type 1 immune cytokine responses, despite a lack of classical macrophage activation. This local microenvironment at the site of parasite inoculation may determine the initial course of immune T-cell development.

Indexed as

AdultAnimalsCells, CulturedGene Expression RegulationHumansInterferon-gammaInterleukin-10Interleukin-1alphaInterleukin-1betaInterleukin-6LeishmaniaMacrophagesMaleMiddle AgedOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionInterferon-gammaInterleukin-10Interleukin-1alphaInterleukin-1betaInterleukin-6

Identifiers

PMID18575603
PMCPMC2427198
OpenAlexW2063284549

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.