Evidence map›Paper›PMID 18568028›Full record

ArticleNature immunology2008

Regulation of B cell fate commitment and immunoglobulin heavy-chain gene rearrangements by Ikaros.

Damien Reynaud, Ignacio A Demarco, Karen L Reddy, Hilde Schjerven, Eric Bertolino, Zhengshan Chen, Stephen T Smale, Susan Winandy, Harinder Singh

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed, 1 pooled it
25.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed, 1 synthesis or guideline pooled it, 252 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Multifaceted roles ofFrontiers in oncology · 2024
    Review
  9. IKAROS Family Transcription Factors in Lymphocyte Differentiation and Function.Advances in experimental medicine and biology · 2024
    Review
  10. Review
  11. Review
  12. Review
  13. Ikaros is a principal regulator of AireScience immunology · 2023
    Article
  14. Article
  15. Review
  16. IKAROS in Acute Leukemia: A Positive Influencer or a Mean Hater?International journal of molecular sciences · 2023
    Review
  17. Review
  18. EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Interactome of Aiolos/Ikaros Reveals Combination Rationale of Cereblon Modulators with HDAC Inhibitors in DLBCL.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article

97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Damien ReynaudHoward Hughes Medical Institute, Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, Illinois 60637, USA.
Ignacio A Demarco
Karen L Reddy
Hilde Schjerven
Eric Bertolino
Zhengshan Chen
Stephen T Smale
Susan Winandy
Harinder Singh
University of Chicago · USUniversity of California, Los Angeles · USNorthwestern University · US

Funding

REGULATION OF TDT EXPRESSION DURING LYMPHOPOIESISR01DK043726 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SMALE, STEPHEN T · 1996 to 2014
$4.2M
Howard Hughes Medical InstituteNIDDK NIH HHS R01 DK043726NIDDK NIH HHS R01 DK43726
6 · The paper itself

Abstract

The transcription factor Ikaros is essential for B cell development. However, its molecular functions in B cell fate specification and commitment have remained elusive. We show here that the transcription factor EBF restored the generation of CD19(+) pro-B cells from Ikaros-deficient hematopoietic progenitors. Notably, these pro-B cells, despite having normal expression of the transcription factors EBF and Pax5, were not committed to the B cell fate. They also failed to recombine variable gene segments at the immunoglobulin heavy-chain locus. Ikaros promoted heavy-chain gene rearrangements by inducing expression of the recombination-activating genes as well as by controlling accessibility of the variable gene segments and compaction of the immunoglobulin heavy-chain locus. Thus, Ikaros is an obligate component of a network that regulates B cell fate commitment and immunoglobulin heavy-chain gene recombination.

Indexed as

AnimalsBinding SitesB-LymphocytesCell DifferentiationCell LineCell LineageGene RearrangementGenes, ImmunoglobulinIkaros Transcription FactorImmunoglobulin Heavy ChainsMiceVDJ RecombinasesIkaros Transcription FactorImmunoglobulin Heavy ChainsVDJ Recombinases

Identifiers

PMID18568028
PMCPMC2699484
OpenAlexW2126766896

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.