Evidence map›Paper›PMID 18567663›Full record

ArticleJournal of bacteriology2008

Autoregulation of swrAA and motility in Bacillus subtilis.

Cinzia Calvio, Cecilia Osera, Giuseppe Amati, Alessandro Galizzi

Abstract read
In one paragraph

Article in Journal of bacteriology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Shelter in a Swarm.Journal of molecular biology · 2015
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Swarming: flexible roaming plans.Journal of bacteriology · 2013
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Cinzia CalvioDipartimento di Genetica e Microbiologia A Buzzati-Traverso, Università degli Studi di Pavia, Via Ferrata 1, 27100 Pavia, Italy. cinzia.calvio@unipv.it
Cecilia Osera
Giuseppe Amati
Alessandro Galizzi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We demonstrate that transcription of the gene swrAA, required for swarming migration in Bacillus subtilis, is driven by two promoters: a sigD-dependent promoter and a putative sigA-dependent promoter, which is inactive during growth in liquid Luria-Bertani medium and becomes active in the presence of the phosphorylated form of the response regulator DegU or on semisolid surfaces. Since sigD transcription is enhanced by SwrAA, this finding reveals that swrA expression is controlled by a positive feedback loop. We also demonstrate that the positive action of SwrAA in swimming and swarming motility is prevented in strains carrying a deletion of the two-component system degS-degU and that this effect is independent of swrAA transcription. Therefore, both DegU and SwrAA must be present to achieve full motility in B. subtilis.

Indexed as

Gene Expression Regulation, BacterialLocomotionArtificial Gene FusionBacillus subtilisBacterial ProteinsBase Sequencebeta-GalactosidaseGenes, ReporterMolecular Sequence DataPromoter Regions, GeneticSigma FactorSignal TransductionTranscription, GeneticBacterial Proteinsbeta-GalactosidaseDegU protein, BacteriaSigma Factor

Identifiers

PMID18567663
PMCPMC2519373

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.