Evidence map›Paper›PMID 18567637›Full record

ArticleBiophysical journal2008

Thermodynamics of activation gating in olfactory-type cyclic nucleotide-gated (CNGA2) channels.

Vasilica Nache, Jana Kusch, Christoph Biskup, Eckhard Schulz, Thomas Zimmer, Volker Hagen, Klaus Benndorf

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Vasilica NacheInstitut für Physiologie II, Friedrich-Schiller-Universität Jena, Jena, Germany.
Jana Kusch
Christoph Biskup
Eckhard Schulz
Thomas Zimmer
Volker Hagen
Klaus Benndorf
Friedrich Schiller University Jena · DELeibniz-Forschungsinstitut für Molekulare Pharmakologie · DESchmalkalden University of Applied Sciences · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Olfactory-type cyclic nucleotide-gated (CNG) ion channels open by the binding of cyclic nucleotides to a binding domain in the C-terminus. Employing the Eyring rate theory, we performed a thermodynamic analysis of the activation gating in homotetrameric CNGA2 channels. Lowering the temperature shifted the concentration-response relationship to lower concentrations, resulting in a decrease of both the enthalpy DeltaH and entropy DeltaS upon channel opening, suggesting that the order of an open CNGA2 channel plus its environment is higher than that of the closed channel. Activation time courses induced by cGMP concentration jumps were used to study thermodynamics of the transition state. The activation enthalpies DeltaH++ were positive at all cGMP concentrations. In contrast, the activation entropy DeltaS++ was positive at low cGMP concentrations and became then negative at increasing cGMP concentrations. The enthalpic and entropic parts of the activation energies approximately balance each other at all cGMP concentrations, leaving the free enthalpy of activation in the range between 19 and 21 kcal/mol. We conclude that channel activation proceeds through different pathways at different cGMP concentrations. Compared to the unliganded channel, low cGMP concentrations generate a transitional state of lower order whereas high cGMP concentrations generate a transitional state of higher order.

Indexed as

AnimalsBinding SitesCyclic GMPCyclic Nucleotide-Gated Cation ChannelsDose-Response Relationship, DrugEntropyIon Channel GatingKineticsLigandsTemperatureThermodynamicsTime FactorsXenopus laevisCyclic GMPCyclic Nucleotide-Gated Cation ChannelsLigands

Identifiers

PMID18567637
PMCPMC2527250
OpenAlexW1970731002

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.