Evidence map›Paper›PMID 18566672›Full record

ArticlePLoS genetics2008

Plasminogen alleles influence susceptibility to invasive aspergillosis.

Aimee K Zaas, Guochun Liao, Jason W Chien, Clarice Weinberg, David Shore, Steven S Giles, Kieren A Marr, Jonathan Usuka, Lauranell H Burch, Lalith Perera and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PLoS genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 2 pooled it
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 2 syntheses or guidelines pooled it, 154 citations in OpenAlex.

  1. Host genetic susceptibility to mycetoma.PLoS neglected tropical diseases · 2020
    Pooled it
  2. Practice Guidelines for the Diagnosis and Management of Aspergillosis: 2016 Update by the Infectious Diseases Society of America.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2016
    Guideline
  3. Review
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  12. Article
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  14. PreventingEmerging microbes & infections · 2020
    Article
  15. Functional prediction and comparative population analysis of variants in genes for proteases and innate immunity related to SARS-CoV-2 infection.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Article
  16. Article
  17. A critical role for plasminogen in inflammation.The Journal of experimental medicine · 2020
    Review
  18. Article
  19. Review
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Aimee K ZaasDuke University Medical Center, Durham, North Carolina, United States of America. aimee.zaas@duke.edu
Guochun Liao
Jason W Chien
Clarice Weinberg
David Shore
Steven S Giles
Kieren A Marr
Jonathan Usuka
Lauranell H Burch
Lalith Perera
John R Perfect
Gary Peltz
David A Schwartz
National Institute of Environmental Health Sciences · USRoche (United States) · USDuke Medical Center · USDuke University · USFred Hutch Cancer Center · USOregon Health & Science University · USUniversity of Wisconsin–Madison · US

Funding

Molecular Genetics Support to Identify Gene/Environment Interactions in DiseaseZICES102546 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI GERRISH, KEVIN · 2009 to 2025
$30.5M
Research Core 3: Environmental Health PolicyP30ES011961 · NIEHS · DUKE UNIVERSITY · PI DI GIULIO, RICHARD · 2004 to 2009
$4.1M
Macromolecular ModelingZIAES043010 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PEDERSEN, LEE · 2009 to 2011
$1.3M
NIEHS STATISTICAL CONSULTING SERVICEZ01ES045005 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PEDDADA, SHYAMAL · 1997 to 2008
$741k
Genetic Determinants of A. Fumigatus SusceptibilityK08AI065837 · NIAID · DUKE UNIVERSITY · PI ZAAS, AIMEE K · 2005 to 2008
$472k
Intramural NIH HHSNIAID NIH HHS K08 AI065837NIAID NIH HHS K08AI065837NIEHS NIH HHS ES-011961NIEHS NIH HHS P30 ES011961
6 · The paper itself

Abstract

Invasive aspergillosis (IA) is a common and life-threatening infection in immunocompromised individuals. A number of environmental and epidemiologic risk factors for developing IA have been identified. However, genetic factors that affect risk for developing IA have not been clearly identified. We report that host genetic differences influence outcome following establishment of pulmonary aspergillosis in an exogenously immune suppressed mouse model. Computational haplotype-based genetic analysis indicated that genetic variation within the biologically plausible positional candidate gene plasminogen (Plg; Gene ID 18855) correlated with murine outcome. There was a single nonsynonymous coding change (Gly110Ser) where the minor allele was found in all of the susceptible strains, but not in the resistant strains. A nonsynonymous single nucleotide polymorphism (Asp472Asn) was also identified in the human homolog (PLG; Gene ID 5340). An association study within a cohort of 236 allogeneic hematopoietic stem cell transplant (HSCT) recipients revealed that alleles at this SNP significantly affected the risk of developing IA after HSCT. Furthermore, we demonstrated that plasminogen directly binds to Aspergillus fumigatus. We propose that genetic variation within the plasminogen pathway influences the pathogenesis of this invasive fungal infection.

Indexed as

AllelesGenetic Predisposition to DiseaseAnimalsAspergillosisAspergillus fumigatusFemaleHumansLung Diseases, FungalMiceMice, Inbred AMice, Inbred AKRMice, Inbred BALB CMice, Inbred C3HMice, Inbred C57BLMice, Inbred DBAMice, Inbred MRL lprPlasminogen

Identifiers

PMID18566672
PMCPMC2423485
OpenAlexW1977451473

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.