Evidence map›Paper›PMID 18566477›Full record

ArticleJournal of biomolecular screening2008

Evaluating PI3 kinase isoforms using Transcreener ADP assays.

Tony A Klink, Karen M Kleman-Leyer, Andrew Kopp, Thane A Westermeyer, Robert G Lowery

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Journal of biomolecular screening, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tony A KlinkBellBrook Labs 5500 Nobel Drive, Suite 250 Madison, WI 53711, USA. tony.klink@bellbrooklabs.com
Karen M Kleman-Leyer
Andrew Kopp
Thane A Westermeyer
Robert G Lowery
Bellbrook Labs (United States) · US

Funding

Generic Fluorescent HTS Assay for Kinases and ATPasesR44CA110535 · NCI · BELLBROOK LABS, LLC · PI LOWERY, ROBERT G · 2006 to 2007
$648k
Generic Fluorescent HTS Assay for Protein KinasesR43CA110535 · NCI · BELLBROOK LABS, LLC · PI LOWERY, ROBERT G · 2005 to 2005
$173k
NCI NIH HHS R43 CA110535NCI NIH HHS R44 CA110535
6 · The paper itself

Abstract

Development of drugs targeting lipid kinases has been delayed by the lack of robust screening assays. Methods are needed that can accommodate the presentation of different acceptor substrates in the optimal lipid environment. The Transcreener ADP Assay relies on homogeneous immunodetection of adenosine diphosphate (ADP), using either fluorescence polarization (FP) or time-resolved fluorescence resonance energy transfer (TR-FRET) as a signal output. Detection of ADP--the invariant product of all kinase reactions--provides complete flexibility for varying lipid substrate parameters. The authors used this assay to optimize dispersal methods for C8 and C16 phosphatidylinositol 4,5 bisphosphate substrates and to assess the effects of chain length on the activity and inhibition of phosphoinositide-3-kinase (PI3K) isoforms. The nonphysiological C8 substrate supported the highest activity. Known inhibitors were profiled using both the FP- and TR-FRET-based assays, and there was excellent concordance (r(2)=0.93) in the IC(50) values. The overall rank order of inhibitors was the same using the C8 and C16 substrates, except for minor deviations. Adenosine triphosphate (ATP) hydrolysis in the absence of substrate was detected with the PI3Kalpha isoform, and inhibitors affected PI3Kalpha intrinsic ATP hydrolysis activity similarly to lipid phosphorylation.

Indexed as

Adenosine DiphosphateAntibodies, MonoclonalBiological AssayEnzyme InhibitorsFluoresceinFluorescence PolarizationFluorescence Resonance Energy TransferFluorescent DyesInhibitory Concentration 50Models, BiologicalPhosphatidylinositol 3-KinasesProtein IsoformsAdenosine DiphosphateAntibodies, MonoclonalEnzyme InhibitorsFluoresceinFluorescent DyesPhosphatidylinositol 3-KinasesProtein Isoforms

Identifiers

PMID18566477
PMCPMC2787408
OpenAlexW2133958904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.