Evidence map›Paper›PMID 18566324›Full record

ArticleBlood2008

DNA hypermethylation and epigenetic silencing of the tumor suppressor gene, SLC5A8, in acute myeloid leukemia with the MLL partial tandem duplication.

Susan P Whitman, Björn Hackanson, Sandya Liyanarachchi, Shujun Liu, Laura J Rush, Kati Maharry, Dean Margeson, Ramana Davuluri, Jing Wen, Tatiana Witte and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 75 citations in OpenAlex.

  1. MicroRNAs and Their Inhibition in ModulatingInternational journal of molecular sciences · 2025
    Article
  2. Effect ofJournal of Korean medical science · 2025
    Article
  3. Article
  4. Dichloroacetate for Cancer Treatment: Some Facts and Many Doubts.Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  5. Article
  6. Postbiotics, Metabolic Signaling, and Cancer.Molecules (Basel, Switzerland) · 2021
    Review
  7. Review
  8. Article
  9. Frontiers in oncology · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Downregulation of SLC5A8 inhibits hepatocellular carcinoma progression through regulation of Wnt/β-catenin signaling.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  16. Article
  17. Relationship between intestinal microbiota and colorectal cancer.World journal of gastrointestinal oncology · 2015
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Susan P WhitmanComprehensive Cancer Center, The Ohio State University, Columbus, USA.
Björn Hackanson
Sandya Liyanarachchi
Shujun Liu
Laura J Rush
Kati Maharry
Dean Margeson
Ramana Davuluri
Jing Wen
Tatiana Witte
Li Yu
Chunhui Liu
Clara D Bloomfield
Guido Marcucci
Christoph Plass
Michael A Caligiuri
Comprehensive Blood & Cancer Center · USDuke University · USLeukemia Research Foundation · USThe Ohio State University · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
PathologyP01CA101956 · NCI · OHIO STATE UNIVERSITY · PI PARTHUN, MARK R · 2006 to 2010
$11.4M
Cancer and Leukemia Group B Human Specimen RepositoriesU24CA114725 · NCI · UNIVERSITY OF CHICAGO · PI BERTAGNOLLI, MONICA M · 2005 to 2014
$11.1M
Cancer and Leukemia Group B - Leukemia Correlative SciencesU10CA101140 · NCI · OHIO STATE UNIVERSITY · PI MARCUCCI, GUIDO · 2003 to 2013
$10.3M
Cancer and Leukemia Group B - The Ohio State UniversityU10CA077658 · NCI · OHIO STATE UNIVERSITY · PI BLOOMFIELD, CLARA D · 1998 to 2013
$6.0M
Functional Characterization of MLL Gene FusionsR01CA089341 · NCI · OHIO STATE UNIVERSITY · PI CALIGIURI, MICHAEL A · 2002 to 2013
$2.8M
FLT3 GENOTYPES IN ACUTE MYELOID LEUKEMIAK01CA096887 · NCI · OHIO STATE UNIVERSITY · PI WHITMAN, SUSAN P · 2002 to 2006
$649k
Aberrant DNA Methylation in Acute Myeloid LeukemiaK08CA089317 · NCI · OHIO STATE UNIVERSITY · PI RUSH, LAURA J · 2002 to 2006
$576k
NCI NIH HHS CA016058NCI NIH HHS CA077658NCI NIH HHS CA089317NCI NIH HHS CA089341NCI NIH HHS CA096887NCI NIH HHS CA101140NCI NIH HHS CA101956NCI NIH HHS CA114725NCI NIH HHS K01 CA096887NCI NIH HHS K08 CA089317NCI NIH HHS P01 CA101956NCI NIH HHS P30 CA016058NCI NIH HHS R01 CA089341NCI NIH HHS U10 CA077658NCI NIH HHS U10 CA101140NCI NIH HHS U24 CA114725
6 · The paper itself

Abstract

Posttranslationally modified histones and DNA hypermethylation frequently interplay to deregulate gene expression in cancer. We report that acute myeloid leukemia (AML) with an aberrant histone methyltransferase, the mixed lineage leukemia partial tandem duplication (MLL-PTD), exhibits increased global DNA methylation versus AML with MLL-wildtype (MLL-WT; P = .02). Among the differentially methylated genes, the SLC5A8 tumor suppressor gene (TSG) was more frequently hypermethylated (P = .003). In MLL-PTD(+) cell lines having SLC5A8 promoter hypermethylation, incubation with decitabine activated SLC5A8 expression. Ectopic SLC5A8 expression enhanced histones H3 and H4 acetylation in response to the histone deacetylase inhibitor, valproate, consistent with the encoded protein-SMCT1-short-chain fatty acid transport function. In addition, enhanced cell death was observed in SMCT1-expressing MLL-PTD(+) AML cells treated with valproate. Within the majority of MLL-PTD AML is a mechanism in which DNA hypermethylation silences a TSG that, together with MLL-PTD, can contribute further to aberrant chromatin remodeling and altered gene expression.

Indexed as

Genes, Tumor SuppressorAdultCation Transport ProteinsChromatin Assembly and DisassemblyDNA MethylationDNA, NeoplasmEpigenesis, GeneticGene ExpressionGene SilencingHistone Deacetylase InhibitorsHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistonesHumansLeukemia, Myeloid, AcuteMonocarboxylic Acid TransportersCation Transport ProteinsDNA, NeoplasmHistone Deacetylase InhibitorsHistone DeacetylasesHistone-Lysine N-MethyltransferaseHistonesKMT2A protein, humanMonocarboxylic Acid TransportersMyeloid-Lymphoid Leukemia ProteinNeoplasm ProteinsSLC5A8 protein, humanValproic Acid

Identifiers

PMID18566324
PMCPMC2518901
OpenAlexW2083855057

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.