Evidence map›Paper›PMID 18565323›Full record

ArticleBiochemical and biophysical research communications2008

Single-stranded DNA-binding proteins regulate the abundance and function of the LIM-homeodomain transcription factor LHX2 in pituitary cells.

Ying Cai, Zhixiong Xu, Lalitha Nagarajan, Stephen J Brandt

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Targeting the cGAS-STING pathway mitigates Huntington disease pathogenesis in a knock-in mouse model.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Ying CaiDepartment of Medicine, Vanderbilt University, Nashville, TN 37232, USA.
Zhixiong Xu
Lalitha Nagarajan
Stephen J Brandt
Vanderbilt University · USNational Institutes of Health · USThe University of Texas MD Anderson Cancer Center · US

Funding

REGULATION AND FUNCTION OF THE TAL1/SCL GENER01HL049118 · NHLBI · VANDERBILT UNIVERSITY · PI BRANDT, STEPHEN J. · 1998 to 2011
$2.4M
SSDP2 Gene Pathway in Myeloid NeoplasmsR01HL074449 · NHLBI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI NAGARAJAN, LALITHA · 2003 to 2006
$1.3M
NHLBI NIH HHS R01 HL049118NHLBI NIH HHS R01 HL074449NHLBI NIH HHS R01 HL49118
6 · The paper itself

Abstract

A family of single-stranded DNA-binding proteins (or SSBPs) has been shown to augment the function of LIM-homeodomain (LIM-HD) transcription factors in embryogenesis by interaction with LIM domain-binding protein-1 (LDB1). No DNA-binding complex has been described, however, containing a LIM-HD protein, LDB1, and SSBP, and the mechanism by which SSBPs affect LIM-HD function had not been elucidated. Through use of electrophoretic mobility shift, antibody supershift, and ChIP analyses, we show that an Lhx2-Ldb1-Ssbp3 complex binds a specific element in the Lhx2 target gene Cga (encoding the alpha subunit of glycoprotein hormones) in the alphaT3-1 pituitary cell line. Using overexpression and knockdown approaches, we demonstrate that SSBP3 inhibits Lhx2 and Ldb1 turnover, stimulates assembly of this DNA-binding complex, promotes its recruitment to the Cga promoter, and enhances Cga transcription. These studies provide novel insights into the regulation of pituitary gene expression and LIM-HD function more generally.

Indexed as

AnimalsBase SequenceCell LineChromatin ImmunoprecipitationDNA-Binding ProteinsDNA, Single-StrandedElectrophoretic Mobility Shift AssayGene Expression RegulationGlycoprotein Hormones, alpha SubunitHomeodomain ProteinsLIM Domain ProteinsLIM-Homeodomain ProteinsMicePituitary GlandPromoter Regions, GeneticTranscription FactorsDNA-Binding ProteinsDNA, Single-StrandedGlycoprotein Hormones, alpha SubunitHomeodomain ProteinsLdb1 protein, mouseLhx2 protein, mouseLIM Domain ProteinsLIM-Homeodomain ProteinsSsbp3 protein, mouseTranscription Factors

Identifiers

PMID18565323
PMCPMC2496924
OpenAlexW2086251819

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.