Evidence map›Paper›PMID 18562664›Full record

ArticleGenetics2008

Sequence divergence impedes crossover more than noncrossover events during mitotic gap repair in yeast.

Caroline Welz-Voegele, Sue Jinks-Robertson

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Multi-Invasion-Induced Rearrangements as a Pathway for Physiological and Pathological Recombination.BioEssays : news and reviews in molecular, cellular and developmental biology · 2018
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Mismatch repair during homologous and homeologous recombination.Cold Spring Harbor perspectives in biology · 2015
    Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Copy number variation in the cattle genome.Functional & integrative genomics · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Caroline Welz-VoegeleDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina 27710, USA.
Sue Jinks-Robertson
Duke Medical Center · USDuke University Hospital · US

Funding

REGULATION OF MITOTIC RECOMBINATION IN YEASTR01GM038464 · NIGMS · EMORY UNIVERSITY · PI JINKS-ROBERTSON, SUE · 1992 to 2015
$3.6M
RECOMBINATION BETWEEN REPEATED SEQUENCE IN YEASTR29GM038464 · NIGMS · EMORY UNIVERSITY · PI JINKS-ROBERTSON, SUE · 1987 to 1991
–
NIGMS NIH HHS GM-038464NIGMS NIH HHS R01 GM038464
6 · The paper itself

Abstract

Homologous recombination between dispersed repeated sequences is important in shaping eukaryotic genome structure, and such ectopic interactions are affected by repeat size and sequence identity. A transformation-based, gap-repair assay was used to examine the effect of 2% sequence divergence on the efficiency of mitotic double-strand break repair templated by chromosomal sequences in yeast. Because the repaired plasmid could either remain autonomous or integrate into the genome, the effect of sequence divergence on the crossover-noncrossover (CO-NCO) outcome was also examined. Finally, proteins important for regulating the CO-NCO outcome and for enforcing identity requirements during recombination were examined by transforming appropriate mutant strains. Results demonstrate that the basic CO-NCO outcome is regulated by the Rad1-Rad10 endonuclease and the Sgs1 and Srs2 helicases, that sequence divergence impedes CO to a much greater extent than NCO events, that an intact mismatch repair system is required for the discriminating identical and nonidentical repair templates, and that the Sgs1 and Srs2 helicases play additional, antirecombination roles when the interacting sequences are not identical.

Indexed as

Crossing Over, GeneticDNA RepairMitosisBase SequenceChromosomes, FungalModels, GeneticSaccharomyces cerevisiae

Identifiers

PMID18562664
PMCPMC2475730
OpenAlexW2164540979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.