Evidence map›Paper›PMID 18562531›Full record

ArticleJournal of virology2008

Structure of the main protease from a global infectious human coronavirus, HCoV-HKU1.

Qi Zhao, Shuang Li, Fei Xue, Yilong Zou, Cheng Chen, Mark Bartlam, Zihe Rao

Abstract read
In one paragraph

Article in Journal of virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Article
  2. Article
  3. A Tale of Two Proteases: MPharmaceuticals (Basel, Switzerland) · 2023
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Crystal structures of human coronavirus NL63 main protease at different pH values.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  18. Review
  19. The missing link: covalent linkages in structural models.Acta crystallographica. Section D, Structural biology · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qi ZhaoTsinghua-Nankai-IBP Joint Research Group for Structural Biology, Tsinghua University, Beijing, China.
Shuang Li
Fei Xue
Yilong Zou
Cheng Chen
Mark Bartlam
Zihe Rao

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The newly emergent human coronavirus HKU1 (HCoV-HKU1) was first identified in Hong Kong in 2005. Infection by HCoV-HKU1 occurs worldwide and causes syndromes such as the common cold, bronchitis, and pneumonia. The CoV main protease (M(pro)), which is a key enzyme in viral replication via the proteolytic processing of the replicase polyproteins, has been recognized as an attractive target for rational drug design. In this study, we report the structure of HCoV-HKU1 M(pro) in complex with a Michael acceptor, inhibitor N3. The structure of HCoV-HKU1 provides a high-quality model for group 2A CoVs, which are distinct from group 2B CoVs such as severe acute respiratory syndrome CoV. The structure, together with activity assays, supports the relative conservation at the P1 position that was discovered by sequencing the HCoV-HKU1 genome. Combined with structural data from other CoV M(pro)s, the HCoV-HKU1 M(pro) structure reported here provides insights into both substrate preference and the design of antivirals targeting CoVs.

Indexed as

Amino Acid SequenceBinding SitesCoronavirusCoronavirus InfectionsDNA, ComplementaryEscherichia coliHumansHydrogen BondingKineticsLeucineModels, MolecularMolecular Sequence DataOxygenPeptide HydrolasesPlasmidsProtein BindingDNA, ComplementaryLeucineOxygenPeptide Hydrolases

Identifiers

PMID18562531
PMCPMC2519634

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.