Evidence map›Paper›PMID 18562501›Full record

ArticleThe Journal of general physiology2008

Amino acid substitutions in the pore helix of GluR6 control inhibition by membrane fatty acids.

Timothy J Wilding, Elisabeth Fulling, Yun Zhou, James E Huettner

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Kainate Receptor Antagonists: Recent Advances and Therapeutic Perspective.International journal of molecular sciences · 2023
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Glutamate receptor pores.The Journal of physiology · 2015
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Timothy J WildingDepartment of Cell Biology and Physiology, Washington University Medical School, St. Louis, MO 63110, USA.
Elisabeth Fulling
Yun Zhou
James E Huettner
Washington University in St. Louis · US

Funding

GLUTAMATE-GATED CHANNELS IN CENTRAL/PERIPHERAL NEURONSR01NS030888 · NINDS · WASHINGTON UNIVERSITY · PI HUETTNER, JAMES E · 1992 to 2016
$4.4M
NINDS NIH HHS NS30888NINDS NIH HHS R01 NS030888
6 · The paper itself

Abstract

RNA editing at the Q/R site in the GluR5 and GluR6 subunits of neuronal kainate receptors regulates channel inhibition by lipid-derived modulators including the cis-unsaturated fatty acids arachidonic acid and docosahexaenoic acid. Kainate receptor channels in which all of the subunits are in the edited (R) form exhibit strong inhibition by these compounds, whereas wild-type receptors that include a glutamine (Q) at the Q/R site in one or more subunits are resistant to inhibition. In the present study, we have performed an arginine scan of residues in the pore loop of the GluR6(Q) subunit. Amino acids within the range from -19 to +7 of the Q/R site of GluR6(Q) were individually mutated to arginine and the mutant cDNAs were expressed as homomeric channels in HEK 293 cells. All but one of the single arginine substitution mutants yielded functional channels. Only weak inhibition, typical of wild-type GluR6(Q) channels, was observed for substitutions +1 to +6 downstream of the Q/R site. However, arginine substitution at several locations upstream of the Q/R site resulted in homomeric channels exhibiting strong inhibition by fatty acids, which is characteristic of homomeric GluR6(R) channels. Based on homology with the pore loop of potassium channels, locations at which R substitution induces susceptibility to fatty acid inhibition face away from the cytoplasm toward the M1 and M3 helices and surrounding lipids.

Indexed as

Amino Acid SubstitutionAmino AcidsAmino Acid SequenceAnimalsArginineCell LineCell MembraneConcanavalin ADocosahexaenoic AcidsElectrophysiologyFatty AcidsGluK2 Kainate ReceptorHumansIon Channel GatingKainic AcidKainic Acid ReceptorsAmino AcidsArginineConcanavalin ADocosahexaenoic AcidsFatty AcidsGluK2 Kainate ReceptorKainic AcidKainic Acid Receptors

Identifiers

PMID18562501
PMCPMC2442176
OpenAlexW2137278233

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.