Evidence map›Paper›PMID 18560354›Full record

ArticleOncogene2008

Gene array analysis reveals a common Runx transcriptional programme controlling cell adhesion and survival.

S Wotton, A Terry, A Kilbey, A Jenkins, P Herzyk, E Cameron, J C Neil

Open access · bronzeAbstract read
In one paragraph

Article in Oncogene, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. RGC-32 is a novel regulator of the T-lymphocyte cell cycle.Experimental and molecular pathology · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Mesenchymal stem cells in joint disease and repair.Nature reviews. Rheumatology · 2013
    Review
  18. Review
  19. The many faces of C/EBPδ and their relevance for inflammation and cancer.International journal of biological sciences · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

S WottonFaculty of Veterinary Medicine, Molecular Oncology Laboratory,Institute of Comparative Medicine, University of Glasgow, Glasgow, Scotland. S.Wotton@vet.gla.ac.uk
A Terry
A Kilbey
A Jenkins
P Herzyk
E Cameron
J C Neil
University of Glasgow · GBMolecular Oncology (United States) · US

Funding

Cancer Research UK A5605
6 · The paper itself

Abstract

The Runx genes are important in development and cancer, where they can act either as oncogenes or tumour suppressors. We compared the effects of ectopic Runx expression in established fibroblasts, where all three genes produce an indistinguishable phenotype entailing epithelioid morphology and increased cell survival under stress conditions. Gene array analysis revealed a strongly overlapping transcriptional signature, with no examples of opposing regulation of the same target gene. A common set of 50 highly regulated genes was identified after further filtering on regulation by inducible RUNX1-ER. This set revealed a strong bias toward genes with annotated roles in cancer and development, and a preponderance of targets encoding extracellular or surface proteins, reflecting the marked effects of Runx on cell adhesion. Furthermore, in silico prediction of resistance to glucocorticoid growth inhibition was confirmed in fibroblasts and lymphoid cells expressing ectopic Runx. The effects of fibroblast expression of common RUNX1 fusion oncoproteins (RUNX1-ETO, TEL-RUNX1 and CBFB-MYH11) were also tested. Although two direct Runx activation target genes were repressed (Ncam1 and Rgc32), the fusion proteins appeared to disrupt the regulation of downregulated targets (Cebpd, Id2 and Rgs2) rather than impose constitutive repression. These results elucidate the oncogenic potential of the Runx family and reveal novel targets for therapeutic inhibition.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsApoptosisCell AdhesionCell SurvivalCore Binding Factor alpha SubunitsFibroblastsMiceNIH 3T3 CellsOligonucleotide Array Sequence AnalysisOncogene ProteinsTranscription, GeneticCore Binding Factor alpha SubunitsOncogene Proteins

Identifiers

PMID18560354
PMCPMC2562521
OpenAlexW2007798124

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.