Evidence map›Paper›PMID 18552282›Full record

ArticleEukaryotic cell2008

Dolichyl-phosphate-glucose is used to make O-glycans on glycoproteins of Trichomonas vaginalis.

Kariona A Grabińska, Sudip K Ghosh, Ziqiang Guan, Jike Cui, Christian R H Raetz, Phillips W Robbins, John Samuelson

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Kariona A GrabińskaDepartment of Molecular and Cell Biology, Boston University Goldman School of Dental Medicine, 715 Albany Street, Evans 425, Boston, MA 02118, USA.
Sudip K Ghosh
Ziqiang Guan
Jike Cui
Christian R H Raetz
Phillips W Robbins
John Samuelson
Boston University · USDuke Medical Center · USDuke University Hospital · US

Funding

STEROL LIPIDSU54GM069338 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DENNIS, EDWARD A · 2003 to 2013
$72.2M
ROBBINS Glycosylation and Glycosidases-Cell and Molecular BiologyR01GM031318 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAMUELSON, JOHN C. · 1985 to 2011
$4.1M
Glycobiology of GiardiaR01AI048082 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SAMUELSON, JOHN C. · 2003 to 2015
$4.0M
PROTEIN GLYCOSYLATION - CELLULAR AND MOLECULAR BIOLOGYR37GM031318 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ROBBINS, PHILLIPS W · 1988 to 1997
–
NIAID NIH HHS AI48082NIAID NIH HHS R01 AI048082NIGMS NIH HHS GM-069338NIGMS NIH HHS GM31318NIGMS NIH HHS R01 GM031318NIGMS NIH HHS U54 GM069338
6 · The paper itself

Abstract

Trichomonas vaginalis, the protist that causes vaginal itching, has a huge genome with numerous gene duplications. Recently we found that Trichomonas has numerous genes encoding putative dolichyl-phosphate-glucose (Dol-P-Glc) synthases (encoded by ALG5 genes) despite the fact that Trichomonas lacks the glycosyltransferases (encoded by ALG6, ALG8, and ALG10 genes) that use Dol-P-Glc to glucosylate dolichyl-PP-linked glycans. In addition, Trichomonas does not have a canonical DPM1 gene, encoding a dolichyl-P-mannose (Dol-P-Man) synthase. Here we show Trichomonas membranes have roughly 300 times the Dol-P-Glc synthase activity of Saccharomyces cerevisiae membranes and about one-fifth the Dol-P-Man synthase activity of Saccharomyces membranes. Endogenous Dol-P-hexoses of Trichomonas are relatively abundant and contain 16 isoprene units. Five paralogous Trichomonas ALG5 gene products have Dol-P-Glc synthase activity when expressed as recombinant proteins, and these Trichomonas Alg5s correct a carboxypeptidase N glycosylation defect in a Saccharomyces alg5 mutant in vivo. A recombinant Trichomonas Dpm1, which is deeply divergent in its sequence, has Dol-P-Man synthase activity. When radiolabeled Dol-P-Glc is incubated with Trichomonas membranes, Glc is incorporated into reducing and nonreducing sugars of O-glycans of endogenous glycoproteins. To our knowledge, this is the first demonstration of Dol-P-Glc as a sugar donor for O-glycans on glycoproteins.

Indexed as

AnimalsDolichol Monophosphate MannoseGlucosyltransferasesGlycoproteinsIntracellular MembranesMannosyltransferasesPolyisoprenyl Phosphate MonosaccharidesPolysaccharidesTrichomonas vaginalisdolichol-D-glucosylmonophosphateDolichol Monophosphate Mannosedolichyl-phosphate beta-D-mannosyltransferaseGlucosyltransferasesGlycoproteinsMannosyltransferasesPolyisoprenyl Phosphate MonosaccharidesPolysaccharides

Identifiers

PMID18552282
PMCPMC2519777
OpenAlexW2150851025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.