Evidence map›Paper›PMID 18547439›Full record

ArticleBMC genomics2008

Transcriptome analysis of Loxosceles laeta (Araneae, Sicariidae) spider venomous gland using expressed sequence tags.

Matheus de F Fernandes-Pedrosa, Inácio de L M Junqueira-de-Azevedo, Rute M Gonçalves-de-Andrade, Leonardo S Kobashi, Diego D Almeida, Paulo L Ho, Denise V Tambourgi

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 127 citations in OpenAlex.

  1. Toxins · 2026
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  7. Article
  8. Review
  9. Bioactive Peptides and Proteins from Centipede Venoms.Molecules (Basel, Switzerland) · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Brown Spider (Toxins · 2019
    Review
  19. Article
  20. Toxins · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Matheus de F Fernandes-PedrosaLaboratório de Imunoquímica, Instituto Butantan, Av. Prof. Vital Brazil, 1500, CEP 05503-900, São Paulo, SP, Brazil. mpedrosa@ufrnet.br
Inácio de L M Junqueira-de-Azevedo
Rute M Gonçalves-de-Andrade
Leonardo S Kobashi
Diego D Almeida
Paulo L Ho
Denise V Tambourgi
Instituto Butantan · BRUniversidade Federal do Rio Grande do Norte · BR

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundThe bite of spiders belonging to the genus Loxosceles can induce a variety of clinical symptoms, including dermonecrosis, thrombosis, vascular leakage, haemolysis, and persistent inflammation. In order to examine the transcripts expressed in venom gland of Loxosceles laeta spider and to unveil the potential of its products on cellular structure and functional aspects, we generated 3,008 expressed sequence tags (ESTs) from a cDNA library.

resultsAll ESTs were clustered into 1,357 clusters, of which 16.4% of the total ESTs belong to recognized toxin-coding sequences, being the Sphingomyelinases D the most abundant transcript; 14.5% include "possible toxins", whose transcripts correspond to metalloproteinases, serinoproteinases, hyaluronidases, lipases, C-lectins, cystein peptidases and inhibitors. Thirty three percent of the ESTs are similar to cellular transcripts, being the major part represented by molecules involved in gene and protein expression, reflecting the specialization of this tissue for protein synthesis. In addition, a considerable number of sequences, 25%, has no significant similarity to any known sequence.

conclusionThis study provides a first global view of the gene expression scenario of the venom gland of L. laeta described so far, indicating the molecular bases of its venom composition.

Indexed as

Amino Acid SequenceAnimalsExpressed Sequence TagsFemaleGene ExpressionGene Expression ProfilingGene LibraryHumansHyaluronoglucosaminidaseMolecular Sequence DataPhosphoric Diester HydrolasesRNA, MessengerSequence Homology, Amino AcidSpider BitesSpidersSpider VenomsHyaluronoglucosaminidaseloxosceles venomPhosphoric Diester HydrolasesRNA, MessengerSpider Venoms

Identifiers

PMID18547439
PMCPMC2440767
OpenAlexW2053585708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.