Evidence map›Paper›PMID 18545656›Full record

ArticlePloS one2008

Homeostatic imbalance between apoptosis and cell renewal in the liver of premature aging Xpd mice.

Jung Yoon Park, Mi-Ook Cho, Shanique Leonard, Brent Calder, I Saira Mian, Woo Ho Kim, Susan Wijnhoven, Harry van Steeg, James Mitchell, Gijsbertus T J van der Horst and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Inflammation and aging: signaling pathways and intervention therapies.Signal transduction and targeted therapy · 2023
    Review
  3. Biomarkers of aging.Science China. Life sciences · 2023
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Metabolism, genomics, and DNA repair in the mouse aging liver.Current gerontology and geriatrics research · 2011
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 3 countries.

Jung Yoon ParkDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Mi-Ook Cho
Shanique Leonard
Brent Calder
I Saira Mian
Woo Ho Kim
Susan Wijnhoven
Harry van Steeg
James Mitchell
Gijsbertus T J van der Horst
Jan Hoeijmakers
Pinchas Cohen
Jan Vijg
Yousin Suh
Albert Einstein College of Medicine · USErasmus MC · NLBuck Institute for Research on Aging · USNational Institute for Public Health and the Environment · NLLawrence Berkeley National Laboratory · USSeoul National University · KRThe University of Texas Health Science Center at San Antonio · USUniversity of California, Los Angeles · US

Funding

THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
Models for DNA repair and cell cycle control variantsU01ES011044 · NIEHS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 2001 to 2006
$5.1M
Mutation accumulation in mice of extended life spanR01AG020438 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 2001 to 2009
$3.1M
Association Analysis- SNPs in Longevity Assurance GenesR01AG024391 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI SUH, YOUSIN · 2004 to 2008
$1.6M
Gene-SNP haplotype analysis of an aging populationR03AG023292 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI SUH, YOUSIN · 2004 to 2005
$146k
NIA NIH HHS P01 AG017242NIA NIH HHS P01 AG17242NIA NIH HHS R01 AG020438NIA NIH HHS R01 AG024391NIA NIH HHS R01AG20438NIA NIH HHS R03 AG023292NIEHS NIH HHS U01 ES011044NIEHS NIH HHS U01ES11044
6 · The paper itself

Abstract

Unrepaired or misrepaired DNA damage has been implicated as a causal factor in cancer and aging. Xpd(TTD) mice, harboring defects in nucleotide excision repair and transcription due to a mutation in the Xpd gene (R722W), display severe symptoms of premature aging but have a reduced incidence of cancer. To gain further insight into the molecular basis of the mutant-specific manifestation of age-related phenotypes, we used comparative microarray analysis of young and old female livers to discover gene expression signatures distinguishing Xpd(TTD) mice from their age-matched wild type controls. We found a transcription signature of increased apoptosis in the Xpd(TTD) mice, which was confirmed by in situ immunohistochemical analysis and found to be accompanied by increased proliferation. However, apoptosis rate exceeded the rate of proliferation, resulting in homeostatic imbalance. Interestingly, a metabolic response signature was observed involving decreased energy metabolism and reduced IGF-1 signaling, a major modulator of life span. We conclude that while the increased apoptotic response to endogenous DNA damage contributes to the accelerated aging phenotypes and the reduced cancer incidence observed in the Xpd(TTD) mice, the signature of reduced energy metabolism is likely to reflect a compensatory adjustment to limit the increased genotoxic stress in these mutants. These results support a general model for premature aging in DNA repair deficient mice based on cellular responses to DNA damage that impair normal tissue homeostasis.

Indexed as

ApoptosisHomeostasisAging, PrematureAnimalsDNA DamageEnergy MetabolismFemaleImmunohistochemistryInsulin-Like Growth Factor ILiverMiceTranscription, GeneticXeroderma Pigmentosum Group D ProteinErcc2 protein, mouseInsulin-Like Growth Factor IXeroderma Pigmentosum Group D Protein

Identifiers

PMID18545656
PMCPMC2396506
OpenAlexW2151106442

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.