Evidence map›Paper›PMID 18543005›Full record

ArticlePediatric nephrology (Berlin, Germany)2008

Low prevalence of NPHS2 mutations in African American children with steroid-resistant nephrotic syndrome.

Gil Chernin, Saskia F Heeringa, Rasheed Gbadegesin, Jinhong Liu, Bernward G Hinkes, Christopher N Vlangos, Virginia Vega-Warner, Friedhelm Hildebrandt

Abstract read
In one paragraph

Article in Pediatric nephrology (Berlin, Germany), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 4 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 4 syntheses or guidelines pooled it, 54 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Guideline
  4. Guideline
  5. Article
  6. Article
  7. Article
  8. Association BetweenFrontiers in medicine · 2022
    Article
  9. Article
  10. Article
  11. Kidney international reports · 2018
    Article
  12. Genetic Basis of Health Disparity in Childhood Nephrotic Syndrome.American journal of kidney diseases : the official journal of the National Kidney Foundation · 2018
    Review
  13. Screening of theFrontiers in genetics · 2018
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Chapter 4: Steroid-resistant nephrotic syndrome in children.Kidney international supplements · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Gil CherninDepartment of Pediatrics, University of Michigan, Ann Arbor, MI, USA.
Saskia F Heeringa
Rasheed Gbadegesin
Jinhong Liu
Bernward G Hinkes
Christopher N Vlangos
Virginia Vega-Warner
Friedhelm Hildebrandt
University of Michigan–Ann Arbor · USMichigan Medicine · US

Funding

TUBULE CELL REGENERATION AND DIFFERENTIATIONP50DK039255 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WIGGINS, ROGER CHARLES · 1987 to 2007
$7.3M
Identification and function of new genes causing childhood nephrotic syndromeR01DK076683 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HILDEBRANDT, FRIEDHELM · 2007 to 2021
$5.3M
Center for Molecular &Cellular Studies of Ped DiseaseK12HD043494 · NICHD · DUKE UNIVERSITY · PI REED, ANN M. · 2003 to 2017
$5.2M
NICHD NIH HHS K12 HD043494NIDDK NIH HHS P50 DK039255NIDDK NIH HHS P50-DK039255NIDDK NIH HHS R01 DK076683NIDDK NIH HHS R01-DK076683
6 · The paper itself

Abstract

In African American (AA) children, focal segmental glomerulosclerosis (FSGS) is the leading cause of nephrotic syndrome (NS). It has been shown that AA children suffer from FSGS and steroid-resistant nephrotic syndrome (SRNS) at a higher frequency and with a more severe renal outcome in comparison with Caucasian children. Previous mutation analysis of large cohorts revealed that a high percentage of childhood SRNS is monogenic and that mutations in podocin (NPHS2) and Wilms' tumor gene 1 (WT1) account for approximately 30% of SRNS in children. To test whether AA children with SRNS have a similar or a higher mutation rate, we performed mutation analysis of NPHS2 and WT1 in a cohort of AA children with SRNS. Direct sequencing was carried out for all exons of NPHS2 and for exons 8 and 9 of WT1. We ascertained 18 children of AA descent in whom renal biopsy findings showed FSGS in 13 patients (72%) and minimal-change disease in five patients (28%). In both NPHS2 and WT1, no disease-causing mutations were detected. Our data strongly suggest that in AA children with SRNS, the frequency of NPHS2 mutations is much lower than in large cohorts of pediatric SRNS patients in the general population. Knowledge of mutation rate of NPHS2 in different populations of SRNS patients facilitates the physician in planning a suitable genetic screening strategy for patients.

Indexed as

MutationAdolescentAdrenal Cortex HormonesBlack or African AmericanChildChild, PreschoolDrug ResistanceFemaleGenes, Wilms TumorHumansInfantInfant, NewbornIntracellular Signaling Peptides and ProteinsKidneyMaleMembrane ProteinsAdrenal Cortex HormonesIntracellular Signaling Peptides and ProteinsMembrane ProteinsNPHS2 protein

Identifiers

PMID18543005
PMCPMC5495478
OpenAlexW2114459573

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.