Evidence map›Paper›PMID 18539308›Full record

ArticleVirology2008

Relationship of HIV-1 and SIV envelope glycoprotein trimer occupation and neutralization.

Emma T Crooks, Pengfei Jiang, Michael Franti, Sharon Wong, Michael B Zwick, James A Hoxie, James E Robinson, Penny L Moore, James M Binley

Abstract read
In one paragraph

Article in Virology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Emma T CrooksTorrey Pines Institute for Molecular Studies, 3550 General Atomics Court, San Diego, CA 92121, USA.
Pengfei Jiang
Michael Franti
Sharon Wong
Michael B Zwick
James A Hoxie
James E Robinson
Penny L Moore
James M Binley
Torrey Pines Institute For Molecular Studies · USNational Institute for Communicable DiseasesNovartis (United States) · USScripps Research Institute · USTulane University · USUniversity of Pennsylvania · US

Funding

Pathogenic Determinants of SIV Envelope GlycoproteinsR01AI049784 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HOXIE, JAMES A · 2001 to 2006
$3.8M
SELECTING ENV TRIMERS IN HIV-VLP VACCINE PRESENTATIONSR01AI058763 · NIAID · TORREY PINES INST FOR MOLECULAR STUDIES · PI BINLEY, JAMES M · 2004 to 2007
$1.9M
Selecting Env Trimers in HIV-VLP Vaccine PresentationsR56AI058763 · NIAID · TORREY PINES INST FOR MOLECULAR STUDIES · PI BINLEY, JAMES M · 2008 to 2009
$591k
ANTIBODIES AGAINST HIV-1 gp41: TOOLS FOR VACCINE DESIGNR21AI058725 · NIAID · SCRIPPS RESEARCH INSTITUTE · PI ZWICK, MICHAEL B · 2004 to 2005
$563k
STABILIZING ENV IN VIRUS-LIKE PARTICLE IMMUNOGENSR21AI049566 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI BINLEY, JAMES M · 2000 to 2001
$520k
NIAID NIH HHS AI49784NIAID NIH HHS AI58725NIAID NIH HHS R01 AI049784NIAID NIH HHS R01 AI058763NIAID NIH HHS R01 AI58763NIAID NIH HHS R21 AI049566NIAID NIH HHS R56 AI058763
6 · The paper itself

Abstract

Insights into the process of HIV-1 neutralization may assist rational vaccine design. Here, we compared antibody neutralization against the JR-FL primary isolate and trimer binding affinities judged by native PAGE. Monovalent Fab-trimer binding and neutralization showed a direct quantitative relationship, implying that neutralization begins as each trimer is occupied by one antibody. At saturation, three Fab or soluble CD4 molecules engaged each trimer. In contrast, a maximum of one soluble CD4 molecule bound to functional SIV trimers with a truncated a gp41 tail. Remarkably, soluble CD4 was found to trigger dramatic enhancement of this virus. Unlike Fabs, a quantitative correlation between JR-FL trimer binding and neutralization was unclear for some, but not all IgGs, as neutralization was markedly increased, but trimer affinity was largely unchanged. In addition, only one molecule of certain gp41-specific IgGs appeared to be able to bind each trimer. We discuss the implications of these findings in weighing the relative contributions of size, multivalent binding and other possible effects of IgGs to explain their increased potency.

Indexed as

AnimalsAntibodies, MonoclonalHIV-1HIV AntibodiesHIV AntigensHIV Envelope Protein gp120Neutralization TestsProtein BindingSimian Immunodeficiency VirusAntibodies, MonoclonalHIV AntibodiesHIV AntigensHIV Envelope Protein gp120

Identifiers

PMID18539308
PMCPMC2516379
OpenAlexW1977119850

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.