Evidence map›Paper›PMID 18535087›Full record

ArticleGlycobiology2008

Disruption of thymopoiesis in ST6Gal I-deficient mice.

Julie H Marino, Chibing Tan, Brenda Davis, Eun-Soo Han, Morgan Hickey, Rebecca Naukam, Ashlee Taylor, Kenton S Miller, C Justin Van De Wiele, T Kent Teague

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Glycobiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. The Inhibitory Role of α2,6-Sialylation in Adipogenesis.The Journal of biological chemistry · 2017
    Article
  8. Siglecs and immune regulation.Annual review of immunology · 2012
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Glycosylation in immune cell trafficking.Immunological reviews · 2009
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Julie H MarinoDepartment of Surgery, University of Oklahoma College of Medicine, Tulsa, OK 74135, USA.
Chibing Tan
Brenda Davis
Eun-Soo Han
Morgan Hickey
Rebecca Naukam
Ashlee Taylor
Kenton S Miller
C Justin Van De Wiele
T Kent Teague
University of Oklahoma · USUniversity of Tulsa · USOklahoma State University Center for Health Sciences · US

Funding

VACCINE-TARGETED IDENTIFICATION OF FITNESS DETERMINANTS IN THE HIV-1 ENVELOPEP20RR016478 · NCRR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI DEBANZIE, JOHN S · 2001 to 2011
$35.8M
NCRR NIH HHS P20RR16478
6 · The paper itself

Abstract

Thymocyte development is accompanied by sequential changes in cell surface glycosylation. For example, medullary thymocytes have increased levels of alpha2,3-linked sialic acid and a loss of asialo core 1 O-glycans as compared to cortical thymocytes. Some of these changes have been linked to fine tuning of the T cell receptor avidity. We analyzed ST6Gal I transcript abundance and levels of alpha2,6-linked sialic acid across thymocyte subsets. We found that ST6Gal I transcript levels increased following T cell receptor beta-selection suggesting that this sialyltransferase may influence the development of early thymocyte populations. Indeed, low levels of alpha2,6-linked sialic acid were found in the earliest T lineage cells, and then increased in T cell receptor beta-selected cells. To determine whether ST6Gal I influences T cell development, we analyzed ST6Gal I-deficient mice for disruptions in thymocyte populations. We found reduced thymic cellularity in the ST6Gal I-deficient mice starting in the early thymocyte compartments.

Indexed as

Animalsbeta-D-Galactoside alpha 2-6-SialyltransferaseCell CountCell DifferentiationFemaleGene Expression ProfilingMiceMice, Inbred C57BLMice, KnockoutOligonucleotide Array Sequence AnalysisOligosaccharidesSialyltransferasesThymus Glandbeta-D-Galactoside alpha 2-6-SialyltransferaseOligosaccharidessialooligosaccharidesSialyltransferases

Identifiers

PMID18535087
PMCPMC2733770
OpenAlexW2160234592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.