ArticleVirology journal2008
Complete genome of a European hepatitis C virus subtype 1g isolate: phylogenetic and genetic analyses.
Article in Virology journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Epidemic history of hepatitis C virus genotypes and subtypes in Portugal.Scientific reports · 2018Article
- Full-length genomes of 16 hepatitis C virus genotype 1 isolates representing subtypes 1c, 1d, 1e, 1g, 1h, 1i, 1j and 1k, and two new subtypes 1m and 1n, and four unclassified variants reveal ancestral relationships among subtypes.The Journal of general virology · 2014Article
- Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource.Hepatology (Baltimore, Md.) · 2014Article
- Characterization of full-length hepatitis C virus sequences for subtypes 1e, 1h and 1l, and a novel variant revealed Cameroon as an area in origin for genotype 1.The Journal of general virology · 2013Article
- Enterovirus co-infections and onychomadesis after hand, foot, and mouth disease, Spain, 2008.Emerging infectious diseases · 2011Article
- Recombination in hepatitis C virus.Viruses · 2011Review
- Hepatitis C virus genotype 3a with phylogenetically distinct origin is circulating in Pakistan.Genetic vaccines and therapy · 2011Article
- Epidemiological manifestations of hepatitis C virus genotypes and its association with potential risk factors among Libyan patients.Virology journal · 2010Article
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundHepatitis C virus isolates have been classified into six main genotypes and a variable number of subtypes within each genotype, mainly based on phylogenetic analysis. Analyses of the genetic relationship among genotypes and subtypes are more reliable when complete genome sequences (or at least the full coding region) are used; however, so far 31 of 80 confirmed or proposed subtypes have at least one complete genome available. Of these, 20 correspond to confirmed subtypes of epidemic interest.
resultsWe present and analyse the first complete genome sequence of a HCV subtype 1g isolate. Phylogenetic and genetic distance analyses reveal that HCV-1g is the most divergent subtype among the HCV-1 confirmed subtypes. Potential genomic recombination events between genotypes or subtype 1 genomes were ruled out. We demonstrate phylogenetic congruence of previously deposited partial sequences of HCV-1g with respect to our sequence.
conclusionIn light of this, we propose changing the current status of its subtype-specific designation from provisional to confirmed.
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