Evidence map›Paper›PMID 18533271›Full record

ArticleJournal of neuroscience methods2008

Validation and use of a computer-assisted counting procedure to quantify BrdU-labeled proliferating cells in the early postnatal mouse hippocampus.

Sonali Tatapudy, Sandra Bruening, Georgia Gleason, Miklos Toth

Abstract readValidation Study
In one paragraph

Article in Journal of neuroscience methods, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Paradoxical anxiogenic response of juvenile mice to fluoxetine.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sonali TatapudyDepartment of Pharmacology, Weill Cornell Medical College, New York, NY 10021, USA.
Sandra Bruening
Georgia Gleason
Miklos Toth

Funding

NEUROBIOLOGY OF ANXIETY IN MICE LACKING 5HT 1A RECEPTORR01MH058669 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI TOTH, MIKLOS · 2000 to 2010
$3.1M
Role of TNFa in the genetic control of anxiety levelsR01MH080194 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI TOTH, MIKLOS · 2008 to 2012
$1.9M
NIMH NIH HHS 5R01MH058669NIMH NIH HHS R01 MH058669NIMH NIH HHS R01 MH080194
6 · The paper itself

Abstract

The dentate gyrus is one of the few brain regions that show proliferation of neuronal precursors postnatally and in adult life. Proliferation in the dentate gyrus has been shown to be influenced by exercise, stress and drugs such as antidepressants. Traditionally, proliferation studies rely on the time consuming and subjective manual count of labeled cells. Here we adapted the Metamorph software to automatically count cells labeled in the S phase in the developing dentate gyrus of mice. The validity of the computer-assisted method was established by showing an outcome similar to that obtained with the established manual counting procedure. In addition, by using a genetically modified mouse line with increased proliferation, the ability of the computer-assisted method to detect changes in proliferation was demonstrated.

Indexed as

Cell ProliferationAgingAnimalsAnimals, NewbornBromodeoxyuridineCell CountComputersDentate GyrusHippocampusImage CytometryMiceMice, KnockoutMice, Neurologic MutantsNeuronsReproducibility of ResultsSoftwareBromodeoxyuridine

Identifiers

PMID18533271
PMCPMC2577072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.