Evidence map›Paper›PMID 18528987›Full record

ArticleJournal of the American Chemical Society2008

Conformational changes in the metallo-beta-lactamase ImiS during the catalytic reaction: an EPR spectrokinetic study of Co(II)-spin label interactions.

Narayan Sharma, Zhenxin Hu, Michael W Crowder, Brian Bennett

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Conformational dynamics of metallo-β-lactamase CcrA during catalysis investigated by using DEER spectroscopy.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2015
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Narayan SharmaDepartment of Chemistry and Biochemistry, Miami University, Oxford, Ohio 45056, USA.
Zhenxin Hu
Michael W Crowder
Brian Bennett
Medical College of Wisconsin · USMiami University · US

Funding

TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
Substrate &Inhibitor Binding in Leucine AminopeptidaseR01AI056231 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI BENNETT, BRIAN · 2003 to 2007
$923k
METALLO BETA LACTAMASE FROM X MALTOPHILIAR29AI040052 · NIAID · MIAMI UNIVERSITY OXFORD · PI CROWDER, MICHAEL W · 1998 to 2002
$273k
CONFORMATION OF AMIDE SUBSTITUTED SUGARSR15GM040052 · NIGMS · CARLETON COLLEGE · PI BUFFINGTON, LYNN A · 1988 to 1988
–
NIAID NIH HHS AI056231NIAID NIH HHS R01 AI056231NIAID NIH HHS R29 AI040052NIBIB NIH HHS EB001980NIBIB NIH HHS P41 EB001980NIGMS NIH HHS GM40052
6 · The paper itself

Abstract

Metallo-beta-lactamases are responsible for conferring antibiotic resistance on certain pathogenic bacteria. In consequence, the search for inhibitors that may be useful in combating antibiotic resistance has fueled much study of the active sites of these enzymes. There exists circumstantial evidence that the binding of substrates and inhibitors to metallo-beta-lactamases may involve binding to the organic part of the molecule, in addition to or prior to binding to one or more active site metal ions. It has also been postulated that a conformational change may accompany this putative binding. In the present study, electron paramagnetic resonance spectrokinetic study of a spin-labeled variant of the class B2 metallo-beta-lactamase ImiS identified movement of a component residue on a conserved alpha-helix in a catalytically competent time upon formation of a transient reaction intermediate with the substrate imipenem. In a significant subpopulation of ImiS, this conformational change was not associated with substrate binding to the active site metal ion but, rather, represents a distinct step in the reaction with ImiS. This observation has implications regarding the determinants of substrate specificity in metallo-beta-lactamases and the design of potentially clinically useful inhibitors.

Indexed as

CobaltBacterial Proteinsbeta-LactamasesCatalysisElectron Spin Resonance SpectroscopyKineticsProtein ConformationSpin LabelsSubstrate SpecificityBacterial Proteinsbeta-LactamasesCobaltImiS protein, Aeromonas veroniiSpin Labels

Identifiers

PMID18528987
PMCPMC2574873
OpenAlexW2077574122

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.