ArticlePlant molecular biology2008
Gene expression profiling of M. truncatula transcription factors identifies putative regulators of grain legume seed filling.
Article in Plant molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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Who cites it
38 citing papers in PubMed, 85 citations in OpenAlex.
- Spatio-temporal transcriptome and storage compound profiles of developing faba bean (Frontiers in plant science · 2024Article
- Sodium Accumulation in Infected Cells and Ion Transporters Mistargeting in Nodules ofInternational journal of molecular sciences · 2022Article
- Seed Development and Protein Accumulation Patterns in Faba Bean (Journal of agricultural and food chemistry · 2022Article
- Multi-Omics Techniques for Soybean Molecular Breeding.International journal of molecular sciences · 2022Review
- Potassium content diminishes in infected cells of Medicago truncatula nodules due to the mislocation of channels MtAKT1 and MtSKOR/GORK.Journal of experimental botany · 2021Article
- Genome-Wide Association Studies of Seed Performance Traits in Response to Heat Stress inFrontiers in plant science · 2021Article
- Expression Patterns of Key Hormones Related to Pea (Frontiers in plant science · 2019Article
- Oil body biogenesis and biotechnology in legume seeds.Plant cell reports · 2017Review
- Systems biology and genome-wide approaches to unveil the molecular players involved in the pre-germinative metabolism: implications on seed technology traits.Plant cell reports · 2017Review
- Regulation of Carbon Partitioning in the Seed of the Model LegumeFrontiers in plant science · 2017Article
- Pea Marker Database (PMD) - A new online database combining known pea (Pisum sativum L.) gene-based markers.PloS one · 2017Article
- A Snapshot of Functional Genetic Studies in Medicago truncatula.Frontiers in plant science · 2016Review
- QTLomics in Soybean: A Way Forward for Translational Genomics and Breeding.Frontiers in plant science · 2016Review
- Protocols for Obtaining Zygotic and Somatic Embryos for Studying the Regulation of Early Embryo Development in the Model Legume Medicago truncatula.Journal of visualized experiments : JoVE · 2015Article
- ITIS, a bioinformatics tool for accurate identification of transposon insertion sites using next-generation sequencing data.BMC bioinformatics · 2015Article
- DASH transcription factor impacts Medicago truncatula seed size by its action on embryo morphogenesis and auxin homeostasis.The Plant journal : for cell and molecular biology · 2015Article
- Transcriptional profiling of Medicago truncatula during Erysiphe pisi infection.Frontiers in plant science · 2015Article
- An RNA-Seq based gene expression atlas of the common bean.BMC genomics · 2014Article
- The 2HA line of Medicago truncatula has characteristics of an epigenetic mutant that is weakly ethylene insensitive.BMC plant biology · 2014Article
- Legume genomics: understanding biology through DNA and RNA sequencing.Annals of botany · 2014Review
Corrections and comments
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Authors and funding
9 authors at 5 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Legume seeds represent a major source of proteins for human and livestock diets. The model legume Medicago truncatula is characterized by a process of seed development very similar to that of other legumes, involving the interplay of sets of transcription factors (TFs). Here, we report the first expression profiling of over 700 M. truncatula genes encoding putative TFs throughout seven stages of seed development, obtained using real-time quantitative RT-PCR. A total of 169 TFs were selected which were expressed at late embryogenesis, seed filling or desiccation. The site of expression within the seed was examined for 41 highly expressed transcription factors out of the 169. To identify possible target genes for these TFs, the data were combined with a microarray-derived transcriptome dataset. This study identified 17 TFs preferentially expressed in individual seed tissues and 135 corresponding co-expressed genes, including possible targets. Certain of the TFs co-expressed with storage protein mRNAs correspond to those already known to regulate seed storage protein synthesis in Arabidopsis, whereas the timing of expression of others may be more specifically related to the delayed expression of the legumin-class storage proteins observed in legumes.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.