Evidence map›Paper›PMID 18524933›Full record

ArticleMicrobiology (Reading, England)2008

The role of SOS boxes in enteric bacteriocin regulation.

Osnat Gillor, Jan A C Vriezen, Margaret A Riley

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 83 citations in OpenAlex.

  1. From predicted bacteriocins to ecological function.Current research in microbial sciences · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Repression ofJournal of bacteriology · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The Biology of Colicin M and Its Orthologs.Antibiotics (Basel, Switzerland) · 2021
    Review
  16. Article
  17. ThemSphere · 2021
    Article
  18. Frontiers in pharmacology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Osnat GillorDepartment of Environmental Hydrology and Microbiology, Zuckerberg Institute for Water Research, J. Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede-Boqer Campus, 84990 Midreshet Ben-Gurion, Israel.
Jan A C VriezenDepartment of Biology, University of Massachusetts Amherst, Amherst, MA 01003, USA.
Margaret A RileyDepartment of Biology, University of Massachusetts Amherst, Amherst, MA 01003, USA.
University of Massachusetts Amherst · USBen-Gurion University of the Negev · IL

Funding

Evolution of Stress-Induced Bacterial ToxinsR01AI064588 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI RILEY, MARGARET A. · 2007 to 2010
$1.5M
MOLECULAR EVOLUTION OF ENTERIC BACTERIOCINSR01GM058433 · NIGMS · YALE UNIVERSITY · PI RILEY, MARGARET A. · 1999 to 2002
$879k
NIAID NIH HHS R01 AI064588NIGMS NIH HHS GM58433-02PHS HHS A1064588-01A2
6 · The paper itself

Abstract

Bacteriocins are a large and functionally diverse family of toxins found in all major lineages of Bacteria. Colicins, those bacteriocins produced by Escherichia coli, serve as a model system for investigations of bacteriocin structure-function relationships, genetic organization, and their ecological role and evolutionary history. Colicin expression is often dependent on host regulatory pathways (such as the SOS system), is usually confined to times of stress, and results in death of the producing cells. This study investigates the role of the SOS system in mediating this unique form of toxin expression. A comparison of all the sequenced enteric bacteriocin promoters reveals that over 75 % are regulated by dual, overlapping SOS boxes, which serve to bind two LexA repressor proteins. Furthermore, a highly conserved poly-A motif is present in both of the binding sites examined, indicating enhanced affinity of the LexA protein for the binding site. The use of gene expression analysis and deletion mutations further demonstrates that these unique LexA cooperative binding regions result in a fine tuning of bacteriocin production, limiting it to times of stress. These results suggest that the evolution of dual SOS boxes elegantly accomplishes the task of increasing the amount of toxin produced by a cell while decreasing the rate of uninduced production, effectively reducing the cost of colicin production. This hypothesis may explain why such a promoter motif is present at such high frequencies in natural populations of bacteriocin-producing enteric bacteria.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBinding SitesColicinsConserved SequenceEscherichia coliLexA Repressor ProteinPromoter Regions, GeneticSerine EndopeptidasesSOS Response, GeneticsBacterial ProteinsColicinsLexA Repressor ProteinSerine Endopeptidases

Identifiers

PMID18524933
PMCPMC2729051
OpenAlexW2159598209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.