Evidence map›Paper›PMID 18523552›Full record

ArticlePloS one2008

Natural variation of model mutant phenotypes in Ciona intestinalis.

Paolo Sordino, Nikos Andreakis, Euan R Brown, Nicola I Leccia, Paola Squarzoni, Raffaella Tarallo, Christian Alfano, Luigi Caputi, Palmira D'Ambrosio, Paola Daniele and 13 more

Abstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. TheFrontiers in cell and developmental biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Paolo SordinoLaboratory of Biochemistry and Molecular Biology, Stazione Zoologica Anton Dohrn, Naples, Italy. sordino@szn.it
Nikos Andreakis
Euan R Brown
Nicola I Leccia
Paola Squarzoni
Raffaella Tarallo
Christian Alfano
Luigi Caputi
Palmira D'Ambrosio
Paola Daniele
Enrico D'Aniello
Salvatore D'Aniello
Sylvie Maiella
Valentina Miraglia
Monia Teresa Russo
Gerarda Sorrenti
Margherita Branno
Lucio Cariello
Paola Cirino
Annamaria Locascio
Antonietta Spagnuolo
Laura Zanetti
Filomena Ristoratore

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe study of ascidians (Chordata, Tunicata) has made a considerable contribution to our understanding of the origin and evolution of basal chordates. To provide further information to support forward genetics in Ciona intestinalis, we used a combination of natural variation and neutral population genetics as an approach for the systematic identification of new mutations. In addition to the significance of developmental variation for phenotype-driven studies, this approach can encompass important implications in evolutionary and population biology. METHODOLOGY/PRINCIPAL

findingsHere, we report a preliminary survey for naturally occurring mutations in three geographically interconnected populations of C. intestinalis. The influence of historical, geographical and environmental factors on the distribution of abnormal phenotypes was assessed by means of 12 microsatellites. We identified 37 possible mutant loci with stereotyped defects in embryonic development that segregate in a way typical of recessive alleles. Local populations were found to differ in genetic organization and frequency distribution of phenotypic classes. CONCLUSIONS/SIGNIFICANCE: Natural genetic polymorphism of C. intestinalis constitutes a valuable source of phenotypes for studying embryonic development in ascidians. Correlating genetic structure and the occurrence of abnormal phenotypes is a crucial focus for understanding the selective forces that shape natural finite populations, and may provide insights of great importance into the evolutionary mechanisms that generate animal diversity.

Indexed as

Genetic VariationAnimalsCiona intestinalisGenetics, PopulationMicrosatellite RepeatsMutationPhenotype

Identifiers

PMID18523552
PMCPMC2391289

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.