Evidence map›Paper›PMID 18523138›Full record

ArticleMolecular pharmacology2008

Novel polymorphic human UDP-glucuronosyltransferase 2A3: cloning, functional characterization of enzyme variants, comparative tissue expression, and gene induction.

Michael H Court, Suwagmani Hazarika, Soundararajan Krishnaswamy, Moshe Finel, J Andrew Williams

Abstract readComparative Study
In one paragraph

Article in Molecular pharmacology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 63 citations in OpenAlex.

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  16. Importance of UDP-glucuronosyltransferases 2A2 and 2A3 in tobacco carcinogen metabolism.Drug metabolism and disposition: the biological fate of chemicals · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Michael H CourtComparative and Molecular Pharmacogenomics Laboratory, Department of Pharmacology and Experimental Therapeutics, Tufts University, 136 Harrison Ave., Boston, MA 02111, USA. michael.court@tufts.edu
Suwagmani Hazarika
Soundararajan Krishnaswamy
Moshe Finel
J Andrew Williams
Tufts University · USUniversity of Helsinki · FIPfizer (United States) · US

Funding

MOLECULAR DETERMINANTS OF UGT FUNCTIONR01GM061834 · NIGMS · TUFTS UNIVERSITY BOSTON · PI COURT, MICHAEL H · 2000 to 2010
$2.4M
Mechanisms of adverse host responses to antibioticsR21GM074369 · NIGMS · TUFTS UNIVERSITY BOSTON · PI COURT, MICHAEL H · 2005 to 2006
$363k
NIGMS NIH HHS R01 GM061834NIGMS NIH HHS R01-GM061834NIGMS NIH HHS R21 GM074369NIGMS NIH HHS R21-GM074369
6 · The paper itself

Abstract

UDP-glucuronosyltransferases (UGTs) are critical to the detoxification of numerous drugs, environmental pollutants, and endogenous molecules. However, as yet not all of the human UGTs have been cloned and characterized. cDNA clones from the UGT2A3 gene (located on chromosome 4q13) were isolated using pooled human liver RNA. Approximately 10% of clones contained a c.1489A>G nucleotide substitution, yielding proteins with a residue 497 alanine (UGT2A3.2) instead of a threonine (UGT2A3.1). The allele frequency of this polymorphism (rs13128286) was 0.13 in a European-American population as determined by direct DNA sequencing. Of 81 structurally diverse glucuronidation substrates tested, UGT2A3 expressed by a baculovirus system selectively glucuronidated bile acids, particularly hyodeoxycholic acid at the 6-hydroxy position. Apparent K(m) values of UGT2A3.1 and UGT2A3.2 for hyodeoxycholic acid 6-glucuronidation were 69 +/- 7 and 44 +/- 12 microM, respectively. Of 29 different extrahepatic tissues evaluated by real-time polymerase chain reaction, UGT2A3 mRNA was most highly expressed in small intestine (160% of liver), colon (78% of liver), and adipose tissue (91% of liver). An in silico scan of the proximal UGT2A3 promoter/5'-regulatory region identified transcription factor consensus elements consistent with tissue-selective expression in liver (HNF1) and intestine (CXD2), as well as induction by rifampicin (pregnane X receptor). In LS180 human intestinal cells, rifampicin increased UGT2A3 mRNA by more than 4.5-fold compared with vehicle, whereas levels were not significantly affected by the arylhydrocarbon receptor ligand beta-naphthoflavone. This is the first report establishing UGT2A3 as a functional enzyme, and it represents significant progress toward the goal of having a complete set of recombinant human UGTs for comparative functional analyses.

Indexed as

Gene Expression Regulation, EnzymologicPolymorphism, GeneticAnimalsBile Acids and SaltsCDX2 Transcription FactorCell LineCloning, MolecularConsensus SequenceDeoxycholic AcidGlucuronidesGlucuronosyltransferaseHepatocyte Nuclear Factor 1Homeodomain ProteinsHumansKineticsLiverBile Acids and SaltsCDX2 protein, humanCDX2 Transcription FactorDeoxycholic AcidGlucuronidesGlucuronosyltransferaseHepatocyte Nuclear Factor 1Homeodomain Proteinshyodeoxycholic acidPregnane X ReceptorReceptors, GlucocorticoidReceptors, SteroidRecombinant ProteinsRifampinRNA, MessengerUGT2A3.2 protein, human

Identifiers

PMID18523138
PMCPMC2574548
OpenAlexW2166953107

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.