Evidence map›Paper›PMID 18522852›Full record

ArticleCell stem cell2008

Caspase activity mediates the differentiation of embryonic stem cells.

Jun Fujita, Ana M Crane, Marlon K Souza, Marion Dejosez, Michael Kyba, Richard A Flavell, James A Thomson, Thomas P Zwaka

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 283 citations in OpenAlex.

  1. Article
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  7. Exploring caspase functions in mouse models.Apoptosis : an international journal on programmed cell death · 2024
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Differential Expression of Stress Adaptation Genes in a DiatomInternational journal of molecular sciences · 2024
    Article
  13. Larval hematopoietic organs of multiplemicroPublication biology · 2024
    Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Cell survival following direct executioner-caspase activation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Review
  20. Non-Apoptotic Role of Apoptotic Caspases in theFrontiers in cell and developmental biology · 2022
    Review

78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jun FujitaCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX 77030, USA.
Ana M Crane
Marlon K Souza
Marion Dejosez
Michael Kyba
Richard A Flavell
James A Thomson
Thomas P Zwaka
Baylor College of Medicine · USThe University of Texas Southwestern Medical Center · USUniversity of Wisconsin–Madison · USYale University · US

Funding

The Role of p53 in Human Embryonic Stem CellsP01GM081627 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SONGYANG, ZHOU · 2007 to 2011
$9.9M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Tissue Engineering of Hematopoietic BoneR01EB005173 · NIBIB · BAYLOR COLLEGE OF MEDICINE · PI HIRSCHI, KAREN KEMPER · 2005 to 2009
$5.9M
Neuro-Vascular RegenerationP20EB007076 · NIBIB · BAYLOR COLLEGE OF MEDICINE · PI HIRSCHI, KAREN KEMPER · 2006 to 2009
$4.4M
NON-APOPTOTIC ACTION OF CASPASES IN PLURIPOTENT EMBRYONIC STEM CELLSR01GM077442 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ZWAKA, THOMAS P. · 2008 to 2012
$1.5M
Human Endothelial Cell DifferentiationR01HL096360 · NHLBI · YALE UNIVERSITY · PI HIRSCHI, KAREN KEMPER · 2009 to 2013
$1.5M
Howard Hughes Medical InstituteNHLBI NIH HHS R01 HL096360NHLBI NIH HHS T32 HL092332NIBIB NIH HHS P20 EB007076NIBIB NIH HHS R01 EB005173NIGMS NIH HHS P01 GM081627NIGMS NIH HHS P01 GM81627NIGMS NIH HHS R01 GM077442
6 · The paper itself

Abstract

Embryonic stem cells (ESCs) are capable of indefinite self-renewal while retaining the ability to differentiate to any of the three germ layers that give rise to all somatic cell types. An emerging view is that a core set of transcription factors, including Oct4, Sox2, and Nanog, form a robust autoregulatory circuit that maintains ESCs in a self-renewing state. To accommodate the capacity of such cells to undergo germ layer-specific differentiation, we predicted a posttranslational mechanism that could negatively regulate these core self-renewal factors. Here we report caspase-induced cleavage of Nanog in differentiating ESCs. Stem cells lacking the Casp3 gene showed marked defects in differentiation, while forced expression of a caspase cleavage-resistant Nanog mutant in ESCs strongly promoted self-renewal. These results link a major component of the programmed cell-death pathway to the regulation of ESC development.

Indexed as

AnimalsCaspase 3Cell Culture TechniquesCell DifferentiationCell LineEmbryo, MammalianEmbryonic Stem CellsGene Expression Regulation, DevelopmentalHomeodomain ProteinsMiceMice, KnockoutMutagenesis, Site-DirectedNanog Homeobox ProteinTranscriptional ActivationTransfectionTransgenesCaspase 3Homeodomain ProteinsNanog Homeobox ProteinNanog protein, mouse

Identifiers

PMID18522852
PMCPMC2494585
OpenAlexW2087367624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.