Evidence map›Paper›PMID 18521610›Full record

ArticlePlant cell reports2008

Dissected effect of a transit peptide of the ADP-glucose pyrophosphorylase gene from sweetpotato (ibAGP2) in increasing foreign protein accumulation.

Man Sup Kwak, Mi-Joung Oh, Kyung-Hee Paek, Jeong Sheop Shin, Jung Myung Bae

Abstract read
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Article in Plant cell reports, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 83% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Man Sup KwakSchool of Life Sciences and Biotechnology, Korea University, Seoul, 136-701, South Korea.
Mi-Joung Oh
Kyung-Hee Paek
Jeong Sheop Shin
Jung Myung Bae
Korea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transit peptide sequence of ibAGP2 (TP2) was found to be capable of targeting protein into the chloroplast in the Arabidopsis protoplasts. TP2 was fused to a beta-glucuronidase (GUS) reporter gene and expressed in Arabidopsis under the control of the ibAGP2 promoter with the aim of dissecting the effect of the transit peptide in elevating foreign protein accumulation in the transgenic plant. beta-glucuronidase protein levels were determined at three different developmental stages and in assorted tissues. TP2 dramatically elevated GUS protein accumulation regardless of developmental stage, but the level of the enhancing effect was developmental stage-dependent. This enhancing effect was strongest at the seedling stage (16-fold) and relatively moderate at the vegetative (tenfold) and reproductive (11-fold) stages. TP2 also elevated GUS protein accumulation to varying degrees (4 to 19-fold) in assorted tissues, with the effect being highest in the primary inflorescence stem and petiole (19-fold) and weakest in the root (fourfold). Although TP2 also increased GUS mRNA levels, the increased levels were not large enough to account for the elevated GUS protein levels, suggesting that the enhancing effect of TP2 does not solely result from increased levels of transcripts. Taken together, our results reveal that the TP2 significantly increased the levels of protein accumulation and that its effectiveness was developmental stage- and tissue-type-dependent in transgenic Arabidopsis. Possible differential targeting efficiencies of different transit peptides are discussed.

Indexed as

Amino Acid SequenceArabidopsisBlotting, NorthernCaulimovirusGene Expression Regulation, PlantGlucose-1-Phosphate AdenylyltransferaseGlucuronidaseIpomoea batatasMolecular Sequence DataPeptidesPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticSequence Homology, Amino AcidGlucose-1-Phosphate AdenylyltransferaseGlucuronidasePeptidesPlant Proteins

Identifiers

PMID18521610
OpenAlexW2126834083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.