Evidence map›Paper›PMID 18521185›Full record

ArticleThe Journal of clinical investigation2008

Variations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels.

Wei-Min Chen, Michael R Erdos, Anne U Jackson, Richa Saxena, Serena Sanna, Kristi D Silver, Nicholas J Timpson, Torben Hansen, Marco Orrù, Maria Grazia Piras and 41 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed, 6 pooled it
17.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 6 syntheses or guidelines pooled it, 177 citations in OpenAlex.

  1. Pooled it
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  7. Trial
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  9. Review
  10. Article
  11. Review
  12. Biomedical reports · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. G6PC1 and G6PC2 influence G6P flux but not HSD11B1 activity.Journal of molecular endocrinology · 2023
    Article
  19. Article
  20. Association ofGlobal medical genetics · 2023
    Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

51 authors at 16 institutions in 6 countries.

Wei-Min ChenDepartment of Public Health Sciences, University of Virginia, Charlottesville, Virginia, USA.
Michael R Erdos
Anne U Jackson
Richa Saxena
Serena Sanna
Kristi D Silver
Nicholas J Timpson
Torben Hansen
Marco Orrù
Maria Grazia Piras
Lori L Bonnycastle
Cristen J Willer
Valeriya Lyssenko
Haiqing Shen
Johanna Kuusisto
Shah Ebrahim
Natascia Sestu
William L Duren
Maria Cristina Spada
Heather M Stringham
Laura J Scott
Nazario Olla
Amy J Swift
Samer Najjar
Braxton D Mitchell
Debbie A Lawlor
George Davey Smith
Yoav Ben-Shlomo
Gitte Andersen
Knut Borch-Johnsen
Torben Jørgensen
Jouko Saramies
Timo T Valle
Thomas A Buchanan
Alan R Shuldiner
Edward Lakatta
Richard N Bergman
Manuela Uda
Jaakko Tuomilehto
Oluf Pedersen
Antonio Cao
Leif Groop
Karen L Mohlke
Markku Laakso
David Schlessinger
Francis S Collins
David Altshuler
Gonçalo R Abecasis
Michael Boehnke
Angelo Scuteri
Richard M Watanabe
National Institutes of Health · USNational Academies of Sciences, Engineering, and Medicine · USUniversity of Michigan · USSteno Diabetes Centers · DKUniversity of Bristol · GBUniversity of Maryland, Baltimore · USUniversity of Southern California · USBroad Institute · USMalmö University · SEUniversity of Eastern Finland · FIUniversity of Helsinki · FISave the Children · USUniversity of Copenhagen · DKUniversity of London · GBUniversity of North Carolina at Chapel Hill · USUniversity of Virginia · US

Funding

Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
Genetic analysis of type II diabetes in Finnish populationZIAHG000024 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ERDOS, MICHAEL · 2009 to 2025
$38.2M
ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MARSH, LAURA · 1985 to 2007
$37.3M
Nation Center- Integrative Biomedical Informatics(RMI)U54DA021519 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2005 to 2010
$21.3M
Zonulin Antibodies in Intestinal Permeabilitiy in IDDMM01RR016500 · NCRR · UNIVERSITY OF MARYLAND BALTIMORE · PI ONUKWUGHA, EBERECHUKWU · 2002 to 2009
$20.2M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
Identifying Genes for Type 2 Diabetes: FUSIONU01DK062370 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOEHNKE, MICHAEL L, SCOTT, LAURA J. · 2009 to 2021
$11.6M
Targeted Genetic Analysis of T2D and Quantitative TraitsR01DK072193 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN L. MOHLKE · 2005 to 2026
$11.3M
Genome-wide Search for CVD Gene-Environment InteractionsU01HL072515 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2002 to 2008
$11.2M
QUANTITATION OF FACTORS REGULATING GLUCOSE TOLERANCER01DK029867 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MARILYN ADER · 1986 to 2026
$11.0M
JHU-UMD Diabetes Research CenterP30DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI AHIMA, REXFORD S. · 2013 to 2017
$9.7M
Identifying Genes for Type 2 Diabetes:FUSIONR01DK062370 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOEHNKE, MICHAEL L, SCOTT, LAURA J. · 2003 to 2025
$6.7M
British Heart FoundationDepartment of HealthIntramural NIH HHS Z01 HG000024Medical Research Council G0600705Medical Research Council G9824960NCRR NIH HHS M01 RR000052NCRR NIH HHS M01 RR016500NCRR NIH HHS M01 RR 16500NHLBI NIH HHS R01 HL069313NHLBI NIH HHS R01 HL69313NHLBI NIH HHS U01 HL072515NHLBI NIH HHS U01 HL72515NIA NIH HHS N01-AG-1-2109NIA NIH HHS R01 AG018728NIA NIH HHS R01 AG18728NIDA NIH HHS U54 DA021519NIDDK NIH HHS DK062370NIDDK NIH HHS DK062418NIDDK NIH HHS DK069922NIDDK NIH HHS DK072193NIDDK NIH HHS P30 DK072488NIDDK NIH HHS P30 DK079637NIDDK NIH HHS R01 DK029867NIDDK NIH HHS R01 DK062370NIDDK NIH HHS R01 DK068495NIDDK NIH HHS R01 DK069922NIDDK NIH HHS R01 DK072193NIDDK NIH HHS R01 DK54361NIDDK NIH HHS R56 DK062370NIDDK NIH HHS U01 DK062370NIDDK NIH HHS U01 DK062418
6 · The paper itself

Abstract

Identifying the genetic variants that regulate fasting glucose concentrations may further our understanding of the pathogenesis of diabetes. We therefore investigated the association of fasting glucose levels with SNPs in 2 genome-wide scans including a total of 5,088 nondiabetic individuals from Finland and Sardinia. We found a significant association between the SNP rs563694 and fasting glucose concentrations (P = 3.5 x 10(-7)). This association was further investigated in an additional 18,436 nondiabetic individuals of mixed European descent from 7 different studies. The combined P value for association in these follow-up samples was 6.9 x 10(-26), and combining results from all studies resulted in an overall P value for association of 6.4 x 10(-33). Across these studies, fasting glucose concentrations increased 0.01-0.16 mM with each copy of the major allele, accounting for approximately 1% of the total variation in fasting glucose. The rs563694 SNP is located between the genes glucose-6-phosphatase catalytic subunit 2 (G6PC2) and ATP-binding cassette, subfamily B (MDR/TAP), member 11 (ABCB11). Our results in combination with data reported in the literature suggest that G6PC2, a glucose-6-phosphatase almost exclusively expressed in pancreatic islet cells, may underlie variation in fasting glucose, though it is possible that ABCB11, which is expressed primarily in liver, may also contribute to such variation.

Indexed as

Polymorphism, Single NucleotideAdultAgedAnalysis of VarianceATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 11Blood GlucoseFastingFinlandFollow-Up StudiesGene FrequencyGenotypeGlucose-6-PhosphataseHumansItalyLinkage DisequilibriumABCB11 protein, humanATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 11Blood GlucoseG6PC2 protein, humanGlucose-6-Phosphatase

Identifiers

PMID18521185
PMCPMC2398737
OpenAlexW2119706813

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.