Evidence map›Paper›PMID 18517226›Full record

ArticleLangmuir : the ACS journal of surfaces and colloids2008

Cholesterol packing around lipids with saturated and unsaturated chains: a simulation study.

Sagar A Pandit, See-Wing Chiu, Eric Jakobsson, Ananth Grama, H L Scott

Open access · greenAbstract read
In one paragraph

Article in Langmuir : the ACS journal of surfaces and colloids, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 109 citations in OpenAlex.

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  12. Improved Coarse-Grained Modeling of Cholesterol-Containing Lipid Bilayers.Journal of chemical theory and computation · 2014
    Article
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  16. Nonintercalating nanosubstrates create asymmetry between bilayer leaflets.Langmuir : the ACS journal of surfaces and colloids · 2012
    Article
  17. The toxicity of amyloid β oligomers.International journal of molecular sciences · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sagar A PanditDepartment of Physics, University of South Florida, Tampa, FL 33620, USA.
See-Wing Chiu
Eric Jakobsson
Ananth Grama
H L Scott
National Center for Supercomputing Applications · US

Funding

NATIONAL CENTER FOR DESIGN:BIOMIMETIC NANOCONDUCTOR(RMI)PN2EY016570 · NEI · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JAKOBSSON, ERIC G · 2005 to 2009
$6.6M
NEI NIH HHS PN2 EY016570PHS HHS UIUC/NIH2006-139-1
6 · The paper itself

Abstract

The fundamental role of cholesterol in the regulation of eukaryotic membrane structure is well-established. However the manner in which atomic level interactions between cholesterol and lipids, with varying degrees of chain unsaturation and polar groups, affect the overall structure and organization of the bilayer is only beginning to be understood. In this paper we describe a series of Molecular Dynamics simulations designed to provide new insights into lipid-cholesterol interactions as a function of chain unsaturation. We have run simulations of varying concentrations of cholesterol in dipalmitoyl phosphatidylcholine (DPPC), palmitoyl-oleyol phosphatidylcholine (POPC), and dioleyol phosphatidylcholine (DOPC) bilayers. Structural analysis of the simulations reveals both atomistic and systemic details of the interactions and are presented here. In particular, we find that the minimum partial molecular area of cholesterol occurs in POPC-Chol mixtures implying the most favorable packing. Physically, this appears to be related to the fact that the two faces of the cholesterol molecule are different from each other and that the steric cross section of cholesterol molecules drops sharply near the small chain tails.

Indexed as

1,2-DipalmitoylphosphatidylcholineCholesterolComputer SimulationLipid BilayersModels, MolecularMolecular ConformationPhosphatidylcholinesWater1,2-Dipalmitoylphosphatidylcholine1,2-oleoylphosphatidylcholine1-palmitoyl-2-oleoylphosphatidylcholineCholesterolLipid BilayersPhosphatidylcholinesWater

Identifiers

PMID18517226
PMCPMC2739443
OpenAlexW2020064424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.