Evidence map›Paper›PMID 18515416›Full record

ArticleJournal of bacteriology2008

A plasmid-borne Shewanella algae Gene, qnrA3, and its possible transfer in vivo between Kluyvera ascorbata and Klebsiella pneumoniae.

Christine Lascols, Isabelle Podglajen, Charlotte Verdet, Valérie Gautier, Laurent Gutmann, Claude-James Soussy, Ekkehard Collatz, Emmanuelle Cambau

Abstract readCase Reports
In one paragraph

Article in Journal of bacteriology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. JMM case reports · 2017
    Article
  5. Article
  6. Mechanisms of drug resistance: quinolone resistance.Annals of the New York Academy of Sciences · 2015
    Review
  7. Plasmid-mediated quinolone resistance.Microbiology spectrum · 2014
    Review
  8. Article
  9. Article
  10. Global fluoroquinolone resistance epidemiology and implictions for clinical use.Interdisciplinary perspectives on infectious diseases · 2012
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Resistance plasmid families in Enterobacteriaceae.Antimicrobial agents and chemotherapy · 2009
    Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Christine LascolsUniversité Paris 12, IFR10, Bactériologie, F-94000 Creteil, France.
Isabelle Podglajen
Charlotte Verdet
Valérie Gautier
Laurent Gutmann
Claude-James Soussy
Ekkehard Collatz
Emmanuelle Cambau
Sorbonne Université · FRUniversité Paris Cité · FRAssistance Publique – Hôpitaux de Paris · FRCentre de Recherche des Cordeliers · FRInserm · FRUniversité Paris-Est Créteil · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plasmid-borne quinolone resistance gene qnrA1 is prevalent in multidrug-resistant Enterobacteriaceae. A chromosomally encoded homologue in Shewanella algae, qnrA3, has been described. We isolated two qnrA3-positive strains, one of Klebsiella pneumoniae (He96) and one of Kluyvera ascorbata (Kas96), from the feces of an immunocompromised outpatient. The qnrA3 allele was identical to that of S. algae except for 5 nucleotides and differed from qnrA1 by 29 nucleotides affecting three amino acids. The analysis of the qnrA3 genetic environment showed that qnrA3 was inserted downstream from an ISCR1 element at a recombination crossover site described for other resistance genes, including qnrA1, and immediately upstream from IS26, a situation not described before. IS26 preceded an incomplete class 1 integron which contained, among other genes, aac(6')-Ib-cr, another transferable quinolone resistance gene, and the beta-lactamase gene bla(OXA-1/30). The 10-kb fragment encompassing qnrA3 was compared to previously described qnrA1-containing plasmids and multidrug-resistant plasmids; it shares identical sequences with pC15a, pHSH2, pQR1, pQKp311H, and pSAL-1 but with rearrangements, deletions, and mutations. Conjugal transfer of qnrA3 was highly efficient (10(-2)) from K. pneumoniae He96 or K. ascorbata Kas96 to Escherichia coli J53 but less so (10(-5)) from either donor to a clinical strain of Enterobacter cloacae. This first description of a plasmid-borne copy and of the in vitro transfer of qnrA3 is taken to illustrate its likely in vivo transfer from S. algae to the Enterobacteriaceae.

Indexed as

Gene Transfer, HorizontalPlasmidsAcetyltransferasesAnti-Bacterial AgentsBacterial ProteinsBase Sequencebeta-LactamasesConjugation, GeneticDNA, BacterialDNA Transposable ElementsDrug Resistance, BacterialEnterobacter cloacaeEnterobacteriaceae InfectionsEscherichia coliFecesGene OrderAcetyltransferasesaminoglycoside N(6')-acetyltransferaseAnti-Bacterial AgentsBacterial Proteinsbeta-LactamasesDNA, BacterialDNA Transposable Elements

Identifiers

PMID18515416
PMCPMC2493261
OpenAlexW2169023942

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.