Evidence map›Paper›PMID 18515358›Full record

ArticleThe Journal of biological chemistry2008

Molecular basis of S-layer glycoprotein glycan biosynthesis in Geobacillus stearothermophilus.

Kerstin Steiner, René Novotny, Daniel B Werz, Kristof Zarschler, Peter H Seeberger, Andreas Hofinger, Paul Kosma, Christina Schäffer, Paul Messner

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Lipopolysaccharide O-antigens-bacterial glycans made to measure.The Journal of biological chemistry · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Single polysaccharide assembly protein that integrates polymerization, termination, and chain-length quality control.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Emerging facets of prokaryotic glycosylation.FEMS microbiology reviews · 2017
    Review
  11. Article
  12. Article
  13. Biogenesis and functions of bacterial S-layers.Nature reviews. Microbiology · 2014
    Review
  14. Article
  15. Bacterial cell-envelope glycoconjugates.Advances in carbohydrate chemistry and biochemistry · 2013
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. The s-layer glycome-adding to the sugar coat of bacteria.International journal of microbiology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Kerstin SteinerCenter for NanoBiotechnology, University of Natural Resources and Applied Life Sciences, Vienna, Austria.
René Novotny
Daniel B Werz
Kristof Zarschler
Peter H Seeberger
Andreas Hofinger
Paul Kosma
Christina Schäffer
Paul Messner
BOKU University · ATÉcole Polytechnique Fédérale de Lausanne · CH

Funding

Austrian Science Fund FWF P 18013Austrian Science Fund FWF P 19047
6 · The paper itself

Abstract

The Gram-positive bacterium Geobacillus stearothermophilus NRS 2004/3a possesses a cell wall containing an oblique surface layer (S-layer) composed of glycoprotein subunits. O-Glycans with the structure [-->2)-alpha-L-Rhap-(1-->3)-beta-L-Rhap-(1-->2)-alpha-L-Rhap-(1-->](n) (= 13-18), a2-O-methyl group capping the terminal repeating unit at the nonreducing end and a -->2)-alpha-L-Rhap-[(1-->3)-alpha-L-Rhap](n) (= 1-2)(1-->3)- adaptor are linked via a beta-D-Galp residue to distinct sites of the S-layer protein SgsE. S-layer glycan biosynthesis is encoded by a polycistronic slg (surface layer glycosylation) gene cluster. Four assigned glycosyltransferases named WsaC-WsaF, were investigated by a combined biochemical and NMR approach, starting from synthetic octyl-linked saccharide precursors. We demonstrate that three of the enzymes are rhamnosyltransferases that are responsible for the transfer of L-rhamnose from a dTDP-beta-L-Rha precursor to the nascent S-layer glycan, catalyzing the formation of the alpha1,3- (WsaC and WsaD) and beta1,2-linkages (WsaF) present in the adaptor saccharide and in the repeating units of the mature S-layer glycan, respectively. These enzymes work in concert with a multifunctional methylrhamnosyltransferase (WsaE). The N-terminal portion of WsaE is responsible for the S-adenosylmethionine-dependent methylation reaction of the terminal alpha1,3-linked L-rhamnose residue, and the central and C-terminal portions are involved in the transfer of L-rhamnose from dTDP-beta-L-rhamnose to the adaptor saccharide to form the alpha1,2- and alpha1,3-linkages during S-layer glycan chain elongation, with the methylation and the glycosylation reactions occurring independently. Characterization of these enzymes thus reveals the complete molecular basis for S-layer glycan biosynthesis.

Indexed as

Gene Expression Regulation, BacterialChromatography, Thin LayerEscherichia coliGeobacillus stearothermophilusGlycosylationMagnetic Resonance SpectroscopyMembrane GlycoproteinsModels, BiologicalModels, ChemicalMultigene FamilyPlasmidsPolysaccharidesProtein Structure, TertiaryRecombinant ProteinsSpectrometry, Mass, Electrospray IonizationMembrane GlycoproteinsPolysaccharidesRecombinant ProteinsS-layer proteins

Identifiers

PMID18515358
PMCPMC3258933
OpenAlexW2048277345

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.