Evidence map›Paper›PMID 18515070›Full record

ArticleBiochimica et biophysica acta2008

Structural and functional properties of peptides based on the N-terminus of HIV-1 gp41 and the C-terminus of the amyloid-beta protein.

Larry M Gordon, Alex Nisthal, Andy B Lee, Sepehr Eskandari, Piotr Ruchala, Chun-Ling Jung, Alan J Waring, Patrick W Mobley

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Larry M GordonLos Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA, USA.
Alex Nisthal
Andy B Lee
Sepehr Eskandari
Piotr Ruchala
Chun-Ling Jung
Alan J Waring
Patrick W Mobley
California State Polytechnic University · USUniversity of California, Los Angeles · USThe Lundquist Institute · US

Funding

The Response of Choline and Folate Status to Controlled Levels of Choline IntakeS06GM053933 · NIGMS · CALIFORNIA STATE POLY U POMONA · PI CAUDILL, MARIE A · 1997 to 2007
$15.1M
X-RAY CRYSTALLOGRAPHIC AREA DETECTORS10RR014867 · NCRR · UNIVERSITY OF ARIZONA · PI MONTFORT, WILLIAM R. · 2000 to 2000
$248k
CORE FACILITY RESEARCH PEPTIDE SYNTHESIZERS10RR014857 · NCRR · LA BIOMED RES INST/ HARBOR UCLA MED CTR · PI YEAMAN, MICHAEL R · 2001 to 2001
$132k
SMALL INSTRUMENTATION GRANTS15GM050483 · NIGMS · CHARLES R. DREW UNIVERSITY OF MED &SCI · PI WARING, ALAN J · 1993 to 1993
–
NCRR NIH HHS 1 S10 RR14867-01A1NCRR NIH HHS S10 RR014857NIGMS NIH HHS GM 50483NIGMS NIH HHS GM 53933NIGMS NIH HHS S06 GM053933
6 · The paper itself

Abstract

Given their high alanine and glycine levels, plaque formation, alpha-helix to beta-sheet interconversion and fusogenicity, FP (i.e., the N-terminal fusion peptide of HIV-1 gp41; 23 residues) and amyloids were proposed as belonging to the same protein superfamily. Here, we further test whether FP may exhibit 'amyloid-like' characteristics, by contrasting its structural and functional properties with those of Abeta(26-42), a 17-residue peptide from the C-terminus of the amyloid-beta protein responsible for Alzheimer's. FTIR spectroscopy, electron microscopy, light scattering and predicted amyloid structure aggregation (PASTA) indicated that aqueous FP and Abeta(26-42) formed similar networked beta-sheet fibrils, although the FP fibril interactions were weaker. FP and Abeta(26-42) both lysed and aggregated human erythrocytes, with the hemolysis-onsets correlated with the conversion of alpha-helix to beta-sheet for each peptide in liposomes. Congo red (CR), a marker of amyloid plaques in situ, similarly inhibited either FP- or Abeta(26-42)-induced hemolysis, and surface plasmon resonance indicated that this may be due to direct CR-peptide binding. These findings suggest that membrane-bound beta-sheets of FP may contribute to the cytopathicity of HIV in vivo through an amyloid-type mechanism, and support the classification of HIV-1 FP as an 'amyloid homolog' (or 'amylog').

Indexed as

Amyloid beta-PeptidesHIV Envelope Protein gp41Peptide FragmentsProtein Structure, SecondaryAmino Acid SequenceColoring AgentsCongo RedErythrocytesHemolysisHIV-1HumansMolecular Sequence DataSpectroscopy, Fourier Transform InfraredAmyloid beta-PeptidesColoring AgentsCongo RedHIV Envelope Protein gp41Peptide Fragments

Identifiers

PMID18515070
PMCPMC2630332
OpenAlexW2166994657

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.