Evidence map›Paper›PMID 18507382›Full record

ArticleJournal of the American Chemical Society2008

Enantiomer-specific binding of ruthenium(II) molecular wires by the amine oxidase of Arthrobacter globiformis.

David B Langley, Doreen E Brown, Lionel E Cheruzel, Stephen M Contakes, Anthony P Duff, Kimberly M Hilmer, David M Dooley, Harry B Gray, J Mitchell Guss, Hans C Freeman

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Copper active sites in biology.Chemical reviews · 2014
    Review
  3. A new crystal form of human diamine oxidase.Acta crystallographica. Section F, Structural biology and crystallization communications · 2010
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

David B LangleySchool of Molecular and Microbial Biosciences, University of Sydney, NSW 2006, Australia.
Doreen E Brown
Lionel E Cheruzel
Stephen M Contakes
Anthony P Duff
Kimberly M Hilmer
David M Dooley
Harry B Gray
J Mitchell Guss
Hans C Freeman
Montana State University · USCalifornia Institute of Technology · US

Funding

ELECTRON-TRANSFER PROCESSES IN IRON AND COPPER PROTEINSR01DK019038 · NIDDK · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI GRAY, HARRY B, WINKLER, JAY R · 1986 to 2023
$7.0M
Structures, Mechanisms, and Biogenesis of Amine OxidasesR01GM027659 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI DOOLEY, DAVID M. · 1985 to 2009
$2.9M
ELECTRON TRANSFER PROCESSES IN IRON AND COPPER PROTEINSR37DK019038 · NIDDK · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI GRAY, HARRY B · 1996 to 2003
$1.2M
NIDDK NIH HHS DK19038NIDDK NIH HHS R01 DK019038NIDDK NIH HHS R37 DK019038NIGMS NIH HHS GM27659NIGMS NIH HHS R01 GM027659
6 · The paper itself

Abstract

The copper amine oxidase from Arthrobacter globiformis (AGAO) is reversibly inhibited by molecular wires comprising a Ru(II) complex head group and an aromatic tail group joined by an alkane linker. The crystal structures of a series of Ru(II)-wire-AGAO complexes differing with respect to the length of the alkane linker have been determined. All wires lie in the AGAO active-site channel, with their aromatic tail group in contact with the trihydroxyphenylalanine quinone (TPQ) cofactor of the enzyme. The TPQ cofactor is consistently in its active ("off-Cu") conformation, and the side chain of the so-called "gate" residue Tyr296 is consistently in the "gate-open" conformation. Among the wires tested, the most stable complex is produced when the wire has a -(CH2)4- linker. In this complex, the Ru(II)(phen)(bpy)2 head group is level with the protein molecular surface. Crystal structures of AGAO in complex with optically pure forms of the C4 wire show that the linker and head group in the two enantiomers occupy slightly different positions in the active-site channel. Both the Lambda and Delta isomers are effective competitive inhibitors of amine oxidation. Remarkably, inhibition by the C4 wire shows a high degree of selectivity for AGAO in comparison with other copper-containing amine oxidases.

Indexed as

Amine Oxidase (Copper-Containing)ArthrobacterBinding SitesCrystallography, X-RayKineticsModels, MolecularProtein BindingRutheniumStereoisomerismSubstrate SpecificityAmine Oxidase (Copper-Containing)Ruthenium

Identifiers

PMID18507382
PMCPMC2518534
OpenAlexW2094634548

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.