Evidence map›Paper›PMID 18506223›Full record

ArticleActa biochimica Polonica2008

Limited proteolysis of E. coli ATP-dependent protease Lon - a unified view of the subunit architecture and characterization of isolated enzyme fragments.

Edward E Melnikov, Anna G Andrianova, Andrey D Morozkin, Anton A Stepnov, Oksana V Makhovskaya, Istvan Botos, Alla Gustchina, Alexander Wlodawer, Tatyana V Rotanova

Open access · greenAbstract read
In one paragraph

Article in Acta biochimica Polonica, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Unique Structural Fold of LonBA Protease fromInternational journal of molecular sciences · 2022
    Article
  3. Review
  4. Article
  5. Cryo-EM structure of substrate-freeCurrent research in structural biology · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Distinct quaternary structures of the AAA+ Lon protease control substrate degradation.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  11. Article
  12. Structure of the N-terminal fragment of Escherichia coli Lon protease.Acta crystallographica. Section D, Biological crystallography · 2010
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Edward E MelnikovShemyakin Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia.
Anna G Andrianova
Andrey D Morozkin
Anton A Stepnov
Oksana V Makhovskaya
Istvan Botos
Alla Gustchina
Alexander Wlodawer
Tatyana V Rotanova
Institute of Bioorganic Chemistry · RUInstitute of Experimental Cardiology · RUFrederick National Laboratory for Cancer Research · USNational Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

Protein StructureZIABC010348 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WLODAWER, ALEXANDER · 2009 to 2025
$27.5M
PROTEIN STRUCTUREZ01BC010348 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WLODAWER, ALEXANDER · 2000 to 2008
$3.2M
Protein ProductionZ01BC011016 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TROPEA, JOSEPH · 2008 to 2008
$521k
Intramural NIH HHS Z01 BC010348Intramural NIH HHS Z01 BC011016
6 · The paper itself

Abstract

We carried out chymotryptic digestion of multimeric ATP-dependent Lon protease from Escherichia coli. Four regions sensitive to proteolytic digestion were located in the enzyme and several fragments corresponding to the individual structural domains of the enzyme or their combinations were isolated. It was shown that (i) unlike the known AAA(+) proteins, the ATPase fragment (A) of Lon has no ATPase activity in spite of its ability to bind nucleotides, and it is monomeric in solution regardless of the presence of any effectors; (ii) the monomeric proteolytic domain (P) does not display proteolytic activity; (iii) in contrast to the inactive counterparts, the AP fragment is an oligomer and exhibits both the ATPase and proteolytic activities. However, unlike the full-length Lon, its AP fragment oligomerizes into a dimer or a tetramer only, exhibits the properties of a non-processive protease, and undergoes self-degradation upon ATP hydrolysis. These results reveal the crucial role played by the non-catalytic N fragment of Lon (including its coiled-coil region), as well as the contribution of individual domains to creation of the quaternary structure of the full-length enzyme, empowering its function as a processive protease.

Indexed as

Adenosine TriphosphateAmino Acid SequenceCatalytic DomainChymotrypsinEscherichia coliEscherichia coli ProteinsKineticsMolecular Sequence DataMutagenesis, Site-DirectedPeptide FragmentsPeptide HydrolasesProtease LaProtein Structure, SecondaryProtein Structure, TertiaryProtein SubunitsRecombinant ProteinsAdenosine TriphosphateChymotrypsinEscherichia coli ProteinsLon protein, E coliPeptide FragmentsPeptide HydrolasesProtease LaProtein SubunitsRecombinant Proteins

Identifiers

PMID18506223
PMCPMC7355814
OpenAlexW2168603821

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.